Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001443645.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_033609964.1	1182274	1182786	-	171	17.5	10.8633	Acr	0.360323492	1493	-5.2323446	Not found in Prophage	Not found in Prophage	-	-	MKTATQLLQQYTFEPVKPKLRVEQRSLAVQHQDRAIPFGHFKIRLKNINNQQSYLLELRQALQLTTATGLQLRLRLHGVHVQYARHLVPSGYHILASLTIKATPQASHGFVHKQVHAAYSVPVTGHYAQNLPTQVPLYVFTDNHQLAINQRELATLFLKGFQSQAFSKVG	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 1	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_080376281.1	1181681	1182160	-	160	-1	6.0952	WP_008678850.1\|HTH_27-0-AcrIIA1-1-AcrIIA1\|45.0\|7.3e-22	0.083743269	144	-2.972758	Not found in Prophage	Not found in Prophage	-	-	MMATPTKNILLDEQLCFALYTASKRYNHFYSEALAPFKLTYPQYITLLALWEKSPMTVRELGSHVNLDSGTLTPLLKRMQTQGWVERKRDTDDERQVNISLSQKAIDAKPEIFAHVNSCMDLLGLDEATYNQIRETVNFASEHIKNADPKKIDYSGEAF	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 2	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_033611986.1	2235379	2235906	-	176	0	6.5294	Acr	0.096441533	87	-2.5933647	11	-2.5933647	PHAGE_Lactob_phig1e_NC_004305-gi\|23455798\|ref\|NP_695171.1\|\|2.12e-80	-	MARKLTPKQQRFADEYIKSGNAADAARKAGYSKRSARSVGQENLTKPDIKQYIDEQMAEIASKRIMDAREAVELLTRIARGEEKETVISSTPEGVYESQKEADLKTRISAVKEILKRYPGDDKLVKAQIRKAAAEADIAEAKARIMNASTDSTEAKVSEYLDKLDDVLGGDSDGN	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 2	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_052048923.1	2235947	2236366	-	140	3.5	8.8541	3300005611_____Ga0074647_1000046_77\|HTH_Crp_2\|AcrIIA7\|39.0\|7.7e-15	0.303784124	94	-2.6793299	12	-2.6793299	PHAGE_Brevib_Sundance_NC_028749-gi\|971482660\|ref\|YP_009194160.1\|\|2.25e-17	AcrIIA7\|42.5	MAVIIHSKYGYEPPEWVQADARLDRWYKDKKRRASKHGAFSLDKNKEEAIMNFGEVLEELKRGNCVARKGWNGKGIFIKLKKGESLNTPNNRFNEVMTHDFIYIDTTGLRTNNPNAPMDRVPWLASQTDMLADDWVVVE	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 3	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_033611988.1	2238920	2239381	-	154	0	6.4613	AcrIIA7-1-WP_033609727.1\|HTH_45\|32.8\|2.8e-11	0.201475643	434	-4.0576673	44	-4.0576673	PHAGE_Lactob_LBR48_NC_027990-gi\|937456737\|ref\|YP_009168574.1\|\|3.17e-56	-	MMGEQQVISDEIFPPIDQEKTIKQVRRFLDKKLPQAVRASGHSVADLKSPSMDGMPKSAPAGNSAEDRITRRLYAEQIVRQTIQAMARCDHECQEILDRLYLQGYSDTMCYMDIGYSKTQYFDRWKPLAMLQFAQSYYLEDLNAYQNRTQTGL	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 3	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_076640085.1	2239509	2239721	-	71	6.5	10.6144	Acr	0.272608055	57	-2.2580078	7	-2.2580078	PHAGE_Lactob_Sha1_NC_019489-gi\|418489797\|ref\|YP_007003549.1\|\|2.54e-20	-	MPKHTKKRSTIKRRHRRMKEHAEAIQMKAIVANLEMNATLTTEQQAQIGQDFIADIMELSERESKQKAAY	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 3	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_052048925.1	2239714	2239938	-	75	0.5	7.0101	3300006879_____Ga0079226_10001862_21\|HTH_3\|AcrIIA1\|42.3\|2.8e-11	0.201707155	550	-4.270026	55	-4.270026	PHAGE_Lactob_PLE3_NC_031125-gi\|100049\|ref\|YP_009292689.1\|\|1.65e-12	-	MVNIWNQVEIVLKQRQLNINQLAKLMGLKSNAVLYEFKHGKIKRPSFELMERIADALDVSMDSFRQNNTGDEDA	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 4	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_027821906.1	2245339	2245851	-	171	1.5	8.39	WP_117725951.1\|HTH_26\|AcrIIA15\|35.7\|0.00025	0.337587847	606	-4.3644495	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_LBR48_NC_027990-gi\|937456713\|ref\|YP_009168550.1\|\|1.04e-41	-	MKNKFAEQLSLALGRDKTLTQQQIADRTHVSPGQLSRLKSGSRSTDSQIRKSLANVINDFWLNYSGARENFGVLSFQNDRQLQGDMFSALMKQKKEQRQRERIEAEFEEAITVKPRDRTPAQQLVIERYPREYAEEISAEITDLAKKAEYAGIPMDKLQEVIDKVNQENG	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 4	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_016511201.1	2246419	2246649	-	77	8.5	10.6822	3300005286_____Ga0065721_10005720_31\|HTH_3-2-AcrIIA14\|36.7\|0.00041	0.133984215	123	-2.8513255	Not found in Prophage	Not found in Prophage	PHAGE_Lister_B054_NC_009813-gi\|157325326\|ref\|YP_001468746.1\|\|7.05e-08	-	MRHWLKEWRDINGLTQKKAAEFLDMPETTLASYEQGHRTPSVGRAKKMAVRMNDISSKKRVKWTYFFEDKVHNTSK	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
Acr-Aca 4	Medium Confidence	Lactobacillus paraplantarum	NZ_CP013130.1	WP_033611997.1	2246236	2246406	-	57	-2	4.5379	Acr	0.469745443	299	-3.707718	Not found in Prophage	Not found in Prophage	-	-	MKPITRDVLINALAKVKPETPRVMFEALSDKALDAEFQAVTAEYNEQASQLMSVSY	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum

Showing 1 to 10 of 20 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_001443645.1	NZ_CP013130.1	2235379	2235906	-	WP_033611986.1	176	0.096441533	87	-2.5933647	11	-2.5933647	---	MARKLTPKQQRFADEYIKSGNAADAARKAGYSKRSARSVGQENLTKPDIKQYIDEQMAEIASKRIMDAREAVELLTRIARGEEKETVISSTPEGVYESQKEADLKTRISAVKEILKRYPGDDKLVKAQIRKAAAEADIAEAKARIMNASTDSTEAKVSEYLDKLDDVLGGDSDGN	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum
GCF_001443645.1	NZ_CP013130.1	2235947	2236366	-	WP_052048923.1	140	0.303784124	94	-2.6793299	12	-2.6793299	AcrIIA7\|42.5	MAVIIHSKYGYEPPEWVQADARLDRWYKDKKRRASKHGAFSLDKNKEEAIMNFGEVLEELKRGNCVARKGWNGKGIFIKLKKGESLNTPNNRFNEVMTHDFIYIDTTGLRTNNPNAPMDRVPWLASQTDMLADDWVVVE	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum

Showing 1 to 2 of 2 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001443645.1	NZ_CP013130	NZ_CP013130_1[302519;303280] (evidence-level=4), NZ_CP013130_2[1344198;1344530] (evidence-level=4), NZ_CP013130_3[1349145;1349416] (evidence-level=4), NZ_CP013130_4[1351689;1352203] (evidence-level=4), NZ_CP013130_5[2311340;2311521] (evidence-level=1), NZ_CP013130_6[2726056;2726234] (evidence-level=1),	6	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=4	CAS-TypeIIA[303312;308045], CAS-TypeIE[1349754;1360329],	2	CAS-TypeIE (n=1), CAS-TypeIIA (n=1),