Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001677495.1 (Total 11 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP015228.1	WP_000438533.1	1200601	1200897	+	99	2.5	8.5138	AcrIIA7-1-WP_072645192.1\|HTH_28\|42.0\|5.4e-09	0.309537289	1894	-4.748167	468	-4.748167	PHAGE_Stx2_vB_EcoP_24B_NC_027984-gi\|937456259\|ref\|YP_009168120.1\|\|2.04e-66	-	MEQTSYSKLSQRDVDRAETDLLINLSTLTQRGLAKMIGCHESKISRTDWRFIASVLCAFGMASDISPISRAFKYALDGLTNKKRPAATERSDQIQMEF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP015228.1	WP_001244621.1	1200920	1201192	+	91	6.5	10.7132	Acr	0.481144285	296	-2.9115088	75	-2.9115088	-	-	MRNKGFNPPDTHKEAKRLRFLRSIDERTQISFVKVARTELLKAEARALLPSLPKEEGYTFIPNAFLEKLLKEDISVSQFNDVLKVFRQGR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP015228.1	WP_001054987.1	1200270	1200494	+	75	8	10.8223	AcrIIA7-2-WP_068305859.1\|HTH_3\|43.7\|1.5e-09	0.14927092	1423	-4.4544196	364	-4.4544196	PHAGE_Escher_PA28_NC_041935-gi\|100029\|ref\|YP_009601905.1\|\|5.63e-42	-	MNLVIQRALKIVGSQKRLADKCGVTQPAVHKWLKGGLVSPEKVTAIVNATGGQIKAYEIRPDLPHLFPKPNQAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 10	Low Confidence	Escherichia coli	NZ_CP012500.1	WP_001364062.1	138738	138875	+	46	5	10.7089	Acr	0.193819639	439	-3.275043	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Sf6_NC_005344-gi\|41057344\|ref\|NP_958230.1\|\|1.29e-05	-	MRKWIRLYKQEIQGVEPVGKAITPEQREIQQLKAQIKRLEMEKKS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 10	Low Confidence	Escherichia coli	NZ_CP012500.1	WP_001364103.1	138951	139142	+	64	8.5	11.9281	AcrVA5-2-WP_087920907.1\|HTH_Tnp_1\|44.9\|1.7e-08	0.167792734	978	-4.0843053	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_SfII_NC_021857-gi\|526244689\|ref\|YP_008318533.1\|\|3.22e-09	-	MQILCYLFGVHRSVYYAQVKRPIDVQRIELRSQVRALRGAAGSRAISQMLRQSGVDAGRWLAR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 11	Low Confidence	Escherichia coli	NZ_CP012500.1	WP_077883683.1	199673	199831	-	53	-1.5	5.4939	Acr	0.372879627	12	-0.34900397	3	-0.34900397	PROPHAGE_Escher_MG1655-gi\|16128284\|ref\|NP_414833.1\|\|9.87e-15	-	MRGDILLSLKVEYLHREYFISWEIMWETVFNYIECDHNWWRRHSWCSDLSLG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 11	Low Confidence	Escherichia coli	NZ_CP012500.1	WP_077816943.1	199804	200010	-	69	1	7.0569	AcrIIIB1-1-WP_110929174.1\|HTH_21\|41.8\|1.7e-05	0.206921686	1044	-4.157253	271	-4.157253	PROPHAGE_Escher_MG1655-gi\|16128284\|ref\|NP_414833.1\|\|1.71e-15	-	MLPSEMMSWQPEFTDKTLSRKPGAVHSERIGVCSAEYQALLKRHNLCGSMSTKGCCYDNACVEIFFFL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 11	Low Confidence	Escherichia coli	NZ_CP012500.1	WP_040091178.1	199976	200320	-	115	-2.5	5.1421	AcrIIIB1-1-WP_110929174.1\|HTH_21\|32.3\|2.6e-09	0.145328391	209	-2.6473014	52	-2.6473014	PHAGE_Entero_BP_4795_NC_004813-gi\|157166063\|ref\|YP_001449315.1\|\|1.90e-69	-	MTRQPSGTVHYNDKGSMYVSLAYTRRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWENRTEVELATLTWVDWYNNRLLLESLGHIPPSEAEKAYYASIGNDELAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP015228.1	WP_001303899.1	1386394	1386588	+	65	-1.5	5.5103	Acr	0.271143834	1335	-4.394553	Not found in Prophage	Not found in Prophage	-	-	MCHRAHQSCTTRDVALDRHLPDCEDILKEVIWAFSDFVRDNRGVYDPEARYPAGNPWYPVTGQF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP015228.1	WP_000958487.1	1386654	1386851	+	66	3	9.5646	AcrIIA13-0-WP_006662529.1\|HTH_17\|70.0\|1.4e-19	0.162703704	124	-2.2701273	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|6.50e-08	-	MLTTTSHDSVFLRADNSLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

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1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001677495.1	NZ_CP015228	NZ_CP015228_1[629828;629924] (evidence-level=1), NZ_CP015228_2[1201625;1201752] (evidence-level=1), NZ_CP015228_3[3449531;3450168] (evidence-level=4), NZ_CP015228_4[3477217;3478465] (evidence-level=4),	4	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[3450265;3458823],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries