Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001941785.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_080963711.1	226974	227357	+	128	-3	4.9675	Rampelli_Norman_01_NODE_2162_length_6647_cov_11.881978_11\|HTH_3\|AcrIIA1\|38.2\|2.2e-05	0.121463352	95	-2.4565454	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_Lj928_NC_005354-gi\|41179296\|ref\|NP_958514.1\|\|1.09e-32	-	MAVHGLKQVDILEKTRPYFTDKVKISKTDLSQYVNGKTEPRSDKLYILAKGLGVSEQWLLGFDDGAPITTDYSQARESLGHSGPNVIDDGLSVDEAVDNLRAYQGKPISDDEKEVLKDIIKGYLDRR	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 1	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667077.1	227362	227760	+	133	-5	5.1211	Acr	0.255451999	556	-4.234957	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_LF1_NC_019486-gi\|418489418\|ref\|YP_007003235.1\|\|2.06e-41	-	MEDLMEWLINYAFDHHIGVQLTSFLQPMTPSTSFSDYRLVVINTRWHKPNEIPFSLAHEIGHVMNGDRGVHAYTAVADTKEEYAANITGIGLLLKYCQEHDIHFTNPIEFCERFGIPMELEYVAILKLNGIM	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_049183995.1	378964	379305	+	114	3	9.7323	Minot_Diet_SRR5088940_NODE_81_length_37086_cov_37.905485_54\|HTH_3\|AcrIIA1\|30.5\|2.8e-13	0.086392025	978	-4.9236665	205	-4.9236665	PHAGE_Lister_A118_NC_003216-gi\|16798819\|ref\|NP_463497.1\|\|2.72e-29	-	MAVGDKIAELRNRRGLSQYQLAKMLNVATSTLGMYETNKRKPNVEMLEKIADVFDVTTDYLLGRDKADTKNPQNDLSRNQKLVAYSIDPDISDEERQAIIEMVQAAKKFRRRI	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667154.1	379314	379595	+	94	-3.5	5.1207	Acr	0.529126942	38	-1.5787365	7	-1.5787365	PHAGE_Lactob_phiPYB5_NC_027982-gi\|937456188\|ref\|YP_009167798.1\|\|1.00e-21	-	MSDLEIIEDLYPELRFWFVDVPDKHYHGHIEGTDVYINCNQSNDDWIRTSLHEVVHYTYDRCNLSDGRSIATLRSEKWAVCESRRAFKRLFDY	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667155.1	379592	380134	+	181	-1.5	5.6579	Acr	0.613188029	737	-4.5786905	166	-4.5786905	-	-	MIYVQKLKTIKAENKSPLRRKDVKKMDVKQNAFLSSFNLYNQYNFDHRIPQSDNWISLPKDGDINFRLSFSVNFSHDMFHLLQDQNTTYYLYVSVFPASIKPSIYLSQQYAKVPTYGDVNFAFGFNDLPIEISNNLIKANNINSIDIQLALSQSTQEDLNFDSSILQNCFFETVFPLVEE	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667156.1	380137	380517	+	127	-0.5	6.3761	Acr	0.326104808	46	-1.7095222	9	-1.7095222	PHAGE_Lactob_Lj928_NC_005354-gi\|41179290\|ref\|NP_958508.1\|\|5.92e-13	-	MNEQHKIISMNKSQPGKRSGSSLDISYSSHDNNGRGDGKMNDKFVTHTELELSNEKLLRHIDEHFKQVDDHFNQLENKMDANKADTDLKFEQVNTKFEEQKVWLYGTAIGIVTATCTIVGFLIHYL	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_081378672.1	380602	381156	+	185	20.5	10.8983	Acr	0.142167477	923	-4.8597913	199	-4.8597913	PHAGE_Lactob_phiPYB5_NC_027982-gi\|937456187\|ref\|YP_009167797.1\|\|1.65e-92	-	MKIIKNKYVLWTTGIFAVIGITQGIGGFIGGAIGGFGISASWVLTFKALSKFNDKRKQMAEERARIPKEVLQKRKEEKARIKAEKKAQADAEAQAVIQRLQKAKQDRMKEKMKCPRCGSRNIQPAGKHTEKFSNGKAAAGTAVGAVAFGPVGAVVGGLASGFTGKQTKESDWVCLDCGRSFTIK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 3	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667207.1	486824	487162	+	113	0	6.477	WP_038482234.1\|HTH_XRE\|AcrIIA1\|44.7\|1.2e-12	0.091539551	58	-1.9742019	13	-1.9742019	PHAGE_Lactob_jlb1_NC_024206-gi\|971848892\|ref\|YP_009035471.1\|\|1.12e-26	-	MTTAQRIKDLRKRHKMSQTELSKFVNVSQATVTAWETGKAEPSSSALNKLADFFDVSADYILGRTNIENINSRKMTIDEAMDTIMSADGKEPTEHDRKLMESIIKAYLDNRD	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 3	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_075667208.1	487165	487563	+	133	2.5	7.4129	Acr	0.186971313	266	-3.4881725	Not found in Prophage	Not found in Prophage	-	-	MDVHNIVKQLNISVHYIDMEKPGYATISADKQLKFVFVSNRYPARVQKVTLIHELEHIAKQSGQTALYNATVSARLKMESEINRCVVYELVDDYIKHTGIEPENINYVDFMQLNYISSDYELVVKKTIKNYK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 4	Low Confidence	Lactobacillus fermentum	NZ_CP019030.1	WP_023466763.1	733728	734024	-	99	8	10.8287	AcrIIA15-1-3300008143_____Ga0114287_102817_8\|HTH_OrfB_IS605\|41.8\|4.1e-17	0.147585701	466	-4.0323825	115	-4.0323825	PHAGE_Lactob_CL1_NC_028888-gi\|971752662\|ref\|YP_009206691.1\|\|6.06e-38	-	MVLKAVKMRIYPNSEQRDRLMQTFGCARFVWNQMLNMQIERRKNNPDAKFVNAFGMNNLLKRLKEEYPWLKQAESTSLQSANRNLADAFQRFFKGPET	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum

Showing 1 to 10 of 15 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001941785.1	NZ_CP019030	NZ_CP019030_1[111023;111143] (evidence-level=1), NZ_CP019030_2[220638;220760] (evidence-level=1), NZ_CP019030_3[458680;458768] (evidence-level=1), NZ_CP019030_4[1768888;1769099] (evidence-level=1), NZ_CP019030_5[1769172;1770307] (evidence-level=4),	5	Nb_arrays_evidence-level_1=4,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIE[1759549;1768858],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries