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Anti-CRISPRDB (2018)
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Tracking Anti-CRISPR Names (2018)
Self-Targeting-Spacer-Searcher (2018)
CRISPRminer (2018)
AcRanker (2020)
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Results
Anti-CRISPR Results -
GCF_002355935.1
(Total 1 loci with Aca homologs)
1. Guilt-by-Association
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1.1 Guilt-by-Association (Tabular View)
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Loci ID
Classification
Organism
Refseq ID
Protein ID
Start
End
Strand
aa Length
Charge
Isoelectric Point
Acr/Aca
PaCRISPR_score
AcRanker Rank
AcRanker Score
AcRanker Rank Prophage
AcRanker Score Prophage
MGE/Propahge Metadata
Acr_Hit
sequence
Self Target w/in 5000 BP
Self Target Outside 5000 BP
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Loci ID
Classification
Organism
Refseq ID
Protein ID
Start
End
Strand
aa Length
Charge
Isoelectric Point
Acr/Aca
PaCRISPR_score
AcRanker Rank
AcRanker Score
AcRanker Rank Prophage
AcRanker Score Prophage
MGE/Propahge Metadata
Acr_Hit
sequence
Self Target w/in 5000 BP
Self Target Outside 5000 BP
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1
Medium Confidence
Rothia aeria
NZ_AP017895.1
WP_128087569.1
1091799
1092269
-
157
-6
4.5641
Acr
0.12314741
147
-3.3060257
Not found in Prophage
Not found in Prophage
-
-
MSTADNPNTPPRPQRIISSVIIQNTPPQRVWEAITQPEFTSQYFFGSRVEVTEDEPGRLRYLSPDGKEVWGDGAILESDPPRLLVVEWRSLYLPDAAHEPASRVTWQLEPWTDGATKLTVTHDRLEDSPVTAQNVASPRGWSFVLAGLKRVLETGE
No
Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia; Rothia aeria
Acr-Aca 1
Medium Confidence
Rothia aeria
NZ_AP017895.1
WP_006888256.1
1092266
1092586
-
107
2
7.4015
WP_131593635.1|HTH_5-3-AcrIF3|35.8|7.4e-10
0.137987304
214
-3.7277312
Not found in Prophage
Not found in Prophage
-
-
MDDDAVFKALADPTRRKLLDKLYTTGGLTQGQLEEGLGMTRFGVAKHLRILEEANLVITQRSGRQKLHYLNAVPIRRIHDRWIDKYTAHQSSALLDLQKNLEEEES
No
Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia; Rothia aeria
Showing 1 to 2 of 2 entries
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1.2 Guilt-by-Association (Graphic View)
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SVG
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Created with Snap
GCF_002355935.1 NZ_AP017895.1 GBA Results Overview
Start/End point:0/2588680
NZ_AP017895.1 Acr-Aca 1
Acr:WP_128087569.1
Aca:WP_006888256.1
1091799
1091999
1092199
1092399
Acr-Aca 1: 1091799-1092586 (-)
1 Target Position:541358-541387
2 Target Position:2360030-2360001
1 Spacer Position:1465388-1465419
2 Spacer Position:1467218-1467249
CRISPR-Cas Array (Self Targeting Spacers)
CAS-TypeIE:1454320-1461609
CAS-TypeIE[1454320, 1461609]
cas3a
cse1
cse2
cas7
cas5
cas6
cas1
cas2
1454320
1455359
1456398
1457437
1458476
1459515
1460554
1461593
......
......
CRISPR (NZ_AP017895_2:1461701-1467400)
1461701
1462740
1463779
1464818
1465857
1466896
1.3 Guilt-by-Association (Jbrowse View)
2. Homology Based
No result on Homology Based method
3. CRISPRCasFinder Summary
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GCF
NC_ID
CRISPR arrays
Nb CRISPRs
Evidence levels
Cas clusters
Nb Cas
Cas Types/ Subtyes
GCF
NC_ID
CRISPR arrays
Nb CRISPRs
Evidence levels
Cas clusters
Nb Cas
Cas Types/ Subtyes
GCF_002355935.1
NZ_AP017895
NZ_AP017895_1[628897;629410] (evidence-level=4), NZ_AP017895_2[1461701;1467400] (evidence-level=4), NZ_AP017895_3[1955099;1955193] (evidence-level=1),
3
Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2
CAS-TypeIE[1454320;1461609],
1
CAS-TypeIE (n=1),
Showing 1 to 1 of 1 entries
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