Results - Acr-Aca DB

Anti-CRISPR Results - GCF_002853965.1 (Total 4 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_000958494.1	708105	708338	+	78	1	7.2006	AcrIIA13-0-WP_006662529.1\|HTH_17\|66.1\|5.6e-22	0.15823536	52	-1.7176192	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|8.63e-08	-	MLTTTSHDSVLLRADDPLIDMNYITSFTGMTDKWFYRLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_000831962.1	708335	708520	+	62	1.5	7.7176	Acr	0.176304493	2564	-5.258834	Not found in Prophage	Not found in Prophage	-	-	MKRVCNTSTLAMCEMPALVLWKSALSLVLATLPLIFLLTPSGQPADYRPFLTDSSFHFYCL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_001303621.1	1236568	1236723	+	52	6.5	10.731	Acr	0.29011738	1759	-4.875452	Not found in Prophage	Not found in Prophage	-	-	MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFGLGRLYLG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_001295364.1	1236720	1237295	+	192	-2.5	5.1335	WP_049578512.1\|HTH_AsnC-type\|AcrIE1\|36.4\|2.5e-24	0.126726755	1051	-4.3411236	Not found in Prophage	Not found in Prophage	PHAGE_Rhizob_vB_RleM_P10VF_NC_025429-gi\|712913000\|ref\|YP_009099832.1\|\|3.04e-09	-	MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_000826503.1	1413911	1414303	-	131	1.5	7.826	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0059	0.277827018	593	-3.7723608	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP024155.1	WP_000472021.1	1414305	1414664	-	120	4.5	10.2523	Acr	0.267907337	2887	-5.3749795	Not found in Prophage	Not found in Prophage	-	-	MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP024156.1	WP_000427403.1	36006	36329	+	108	1.5	7.6362	Acr	0.250641486	404	-3.3882258	Not found in Prophage	Not found in Prophage	PHAGE_Ralsto_RSP15_NC_030948-gi\|100150\|ref\|YP_009277113.1\|\|1.76e-19	-	MENHAKFVATEILNQLGGNRFIAMTGAKNFACFDENGESGLCFRLPSNFAMKGINLVKIKLTFSDTYLVTFSRVRGATVKEISKFDNIYCDQLECLFNEQTGLATRL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP024156.1	WP_000866036.1	36371	36580	+	70	-6.5	4.0385	Acr	0.454863302	179	-2.6115491	Not found in Prophage	Not found in Prophage	-	-	MKVLIGNINIDNYHMLSALAGIAGFDRSIEFTCEISASIEIMEDDFVNKAGILKMLDEFIENDFSIKLV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP024156.1	WP_000814381.1	36677	36901	+	75	1.5	7.2122	Acr	0.212729024	2446	-5.2105947	Not found in Prophage	Not found in Prophage	-	-	MKQSTFPAIVSTTGHVFSVVRVTLCTICLKHEKTGEAYVVIFTDCHNIRDYKKGVVPVLGELYQEDVDLITGKS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP024156.1	WP_000702247.1	36953	37213	+	87	5	10.0665	Acr	0.383700433	830	-4.1063986	Not found in Prophage	Not found in Prophage	-	-	MKIRKGDRQYYLNKEGDTFHLVKRVKTFSKSATLGKTKATVKTVADLVFHEKAFDTIDFASDGLRENDKEIVSMMIQEMSEGKNAK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 11 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_002853965.1	NZ_CP024155	NZ_CP024155_1[656053;656170] (evidence-level=1), NZ_CP024155_2[1063901;1064294] (evidence-level=4), NZ_CP024155_3[1089840;1090659] (evidence-level=4), NZ_CP024155_4[2607354;2607463] (evidence-level=1), NZ_CP024155_5[3191277;3191368] (evidence-level=1),	5	Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[1081611;1089734],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries