Results - Acr-Aca DB

Anti-CRISPR Results - GCF_002950135.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_024196828.1	264046	264270	+	75	8	10.8223	AcrIIA7-2-WP_068305859.1\|HTH_3\|43.7\|4.9e-10	0.151136989	849	-4.20042	204	-4.20042	PHAGE_Escher_PA28_NC_041935-gi\|100029\|ref\|YP_009601905.1\|\|1.78e-42	-	MNLVIQRALKIVGSQKRLADKCGVTQPAVHKWLKGGQVSPEKVTAIVNATGGQIKAYEIRPDLPHLFPKPNQAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 1	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_000438538.1	264409	264708	+	100	3.5	8.7451	AcrIIA7-1-WP_072645192.1\|HTH_28\|41.6\|1.7e-07	0.520036615	1001	-4.3759255	236	-4.3759255	PHAGE_Stx2_vB_EcoP_24B_NC_027984-gi\|937456259\|ref\|YP_009168120.1\|\|4.28e-70	-	MEQTSYSKLSQRDVDRAETDLLINLSTLTQRGLAKMIGCHESKISRTDWRFIASVLCAFGMASDISPISRAFKYALDGLTNKKRPVCKTERSEQIQMEF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 1	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_001244621.1	264731	265003	+	91	6.5	10.7132	Acr	0.481144285	228	-2.9115088	53	-2.9115088	-	-	MRNKGFNPPDTHKEAKRLRFLRSIDERTQISFVKVARTELLKAEARALLPSLPKEEGYTFIPNAFLEKLLKEDISVSQFNDVLKVFRQGR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 2	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_000147081.1	270586	270894	-	103	1.5	8.584	Monaco_MBA4031_NODE_271_length_5088_cov_5.558116_9\|HTH_3\|AcrIIA15\|40.2\|1.6e-15	0.121371969	1519	-4.791094	349	-4.791094	PHAGE_Shigel_Stx_NC_029120-gi\|985761268\|ref\|YP_009226853.1\|\|2.04e-68	-	MTGKRTLPTMTHDEMAAKWMEDPAFKAEYDAIADEFALLDEMLAARKEAGLTQAEVAERMGTKATAITRMESNLASGISGPSFATLKKFARATGKKLQIRFV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 2	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_024258354.1	270884	271213	-	110	8	9.9966	Acr	0.129856986	577	-3.7902079	142	-3.7902079	PHAGE_Shigel_Stx_NC_029120-gi\|985761269\|ref\|YP_009226854.1\|\|2.72e-59	-	MNYTIEYYSEDVRLEVDRLPLSMRARYQHLVERMKIYGSNLGEPHTSAFGDGLFELRIKGNDGIARVFYCTLTGKRIIMLHSFVKKTQKTPPAERKKAETRMKEVKHDW	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 2	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_133299708.1	271336	271542	-	69	-0.5	5.6222	Acr	0.168961961	602	-3.8445215	150	-3.8445215	-	-	MSITITPYIWSLSPPSGLNNLVASCAGLRLPGTETGEPFGSPTQPTINRECDCANNMKKDAGASHIAP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 3	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_119172665.1	273047	273556	+	170	12.5	9.7814	AcrIIA1-3-WP_094517624.1\|HTH_psq\|40.8\|2.3e-23	0.105188205	723	-4.030167	179	-4.030167	PHAGE_Bacill_Slash_NC_022774-gi\|609217165\|ref\|YP_008771998.1\|\|8.09e-29	-	MGDVKEKDIPGFEGIYKVTENGDIISCRKSKKLSHGIKPGGYAFVGLYPGGGKRPSYKMVHRIVAEVFIDNPDGKQEVNHKDGNKLNNKVENLEWVTRAENVKHGFDSGLLVHGFTHHFCKLTPEQVKSIYKSKGKYRDIAKEFGVCAQTVCNIKNKSAYRRFLEGFDV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 3	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_134796716.1	273589	273810	+	74	2	7.6136	Acr	0.157200344	87	-2.0934353	19	-2.0934353	PHAGE_Cronob_ENT47670_NC_019927-gi\|431810535\|ref\|YP_007237596.1\|\|1.65e-39	-	MEFCVLCGRYGVQAAHRNEGKGVGIKVDDCLTAALCVDCHSRIDNGRDMSREERRAEMDRAIVLTLKKLVNNG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 4	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_119172636.1	3018250	3018615	+	122	4.5	7.9464	AcrIIIB1-1-WP_110929174.1\|HTH_21\|38.3\|7.1e-17	0.139763551	316	-3.228088	76	-3.228088	PROPHAGE_Ralsto_GMI1000-gi\|17546155\|ref\|NP_519557.1\|\|2.75e-41	-	MSINGKEHTILLDAVEQLNKDDKPLLHSDQGWQYQMPRWQRWLSDNGITQSMSRRGNCLDNAAMESFFSTLKSECYYLNKYNKLHHLKQDIIDYIEYYNHHRIKEKLDGMSPVQYRLKHFS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii
Acr-Aca 4	Low Confidence	Shigella boydii	NZ_CP026836.1	WP_024258414.1	3018670	3019050	+	127	2.5	8.2761	Acr	0.058729704	1081	-4.44374	260	-4.44374	PHAGE_Stx2_c_1717_NC_011357-gi\|209447151\|ref\|YP_002274236.1\|\|2.11e-88	-	MQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEGPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii

Showing 1 to 10 of 15 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_002950135.1	NZ_CP026836	NZ_CP026836_1[56597;56714] (evidence-level=1), NZ_CP026836_2[1082618;1082741] (evidence-level=1), NZ_CP026836_3[2677468;2677583] (evidence-level=1), NZ_CP026836_4[4632220;4632553] (evidence-level=4),	4	Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIE[4623604;4632123],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries