Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003073835.1 (Total 9 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_001325981.1	448201	448467	+	89	7.5	10.2474	Acr	0.261364753	1704	-4.7755537	Not found in Prophage	Not found in Prophage	-	-	MNKTKAPQGRFSLFSGLCLSLYPAGTQEGFPRRQHTSFEHVVEVPVGVDALIVCHRRFFASVKVYFLTAIFLSSQTIFYRNPERYTAR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_000412430.1	447750	448214	+	155	6.5	9.2499	WP_057265726.1\|HTH_38\|AcrIE7\|44.4\|1.9e-05	0.104256702	2942	-5.334149	Not found in Prophage	Not found in Prophage	-	-	MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVTLRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_001347307.1	1095507	1095659	+	51	2.5	8.1177	Acr	0.21070428	266	-3.0915906	31	-3.0915906	-	-	MSDSVSYVHAFITFLYCALSKSTCAKYLREIICSSRNMWRSYAITITECA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_032198020.1	1095631	1095891	+	87	3	10.085	WP_098846178.1\|HTH_3\|AcrIIA1\|31.5\|0.0009	0.165254525	874	-4.111988	124	-4.111988	PHAGE_Entero_mEp460_NC_019716-gi\|428782355\|ref\|YP_007112113.1\|\|1.30e-58	-	MQSPLRNVRKAHGFTLQHVAAGVQVNPATLSRIERLEQVPSIDLAERLANFFKGEISEMQILYPARFQSSQNQNGFKPQEQEVSRG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_032198019.1	1095884	1096435	+	184	-9	4.496	Acr	0.132792124	214	-2.899395	20	-2.899395	PHAGE_Shigel_SfIV_NC_022749-gi\|557307565\|ref\|YP_008766903.1\|\|1.09e-134	-	MGNHHWKVEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMILQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPNEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGAVACRDCGETNA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_001333629.1	1162696	1162893	+	66	3	8.2853	Acr	0.163351417	1408	-4.587972	Not found in Prophage	Not found in Prophage	-	-	MTKQTTCIACTQQFLSWQEYSPTDFLRFSPVVMPVKVVRCFHHQRRLRLTTSGGDFYDPPSFADG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_021517769.1	1162865	1163071	+	69	2	9.9273	AcrIIA13-0-WP_006662529.1\|HTH_17\|74.6\|4.3e-25	0.151363653	1978	-4.930315	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|4.35e-09	-	MTPPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKMGRSSRWLKSEVEAWLQARIAQSRP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_001447010.1	2397884	2398060	+	59	7.5	11.2298	Acr	0.169200797	1547	-4.6830454	Not found in Prophage	Not found in Prophage	PHAGE_Mannhe_vB_MhS_535AP2_NC_028853-gi\|971749601\|ref\|YP_009203381.1\|\|4.86e-18	-	MKQSEFRRWLESQGVDVANSSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_001270286.1	2398106	2398522	+	139	-5	4.7386	WP_058129004.1\|HTH_26-0-AcrIF4\|34.6\|3.5e-18	0.204337503	2631	-5.2181606	Not found in Prophage	Not found in Prophage	PHAGE_Cronob_ENT39118_NC_019934-gi\|431811073\|ref\|YP_007238142.1\|\|5.10e-45	-	MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Low Confidence	Escherichia coli	NZ_CP029115.1	WP_000826503.1	3393709	3394101	+	131	1.5	7.826	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0061	0.277827018	614	-3.7723608	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

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1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003073835.1	NZ_CP029115	NZ_CP029115_1[660168;660317] (evidence-level=1), NZ_CP029115_2[1299448;1299592] (evidence-level=1), NZ_CP029115_3[1439634;1439730] (evidence-level=1), NZ_CP029115_4[3227672;3227798] (evidence-level=1), NZ_CP029115_5[3723540;3724241] (evidence-level=4), NZ_CP029115_6[3749790;3750124] (evidence-level=4),	6	Nb_arrays_evidence-level_1=4,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[3724347;3732997],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries