Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003193745.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_078096554.1	455016	455201	-	62	5	10.1005	Acr	0.280267118	1190	-4.1480813	Not found in Prophage	Not found in Prophage	-	-	MKTKNLNHFIYSISDLRNLIKDNALFHNYISQETKNFQTSLNPSIAHFLKHKAITMNDQNS	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_000248838.1	455182	455334	-	51	6.5	10.8922	Acr	0.222411201	438	-2.7603488	Not found in Prophage	Not found in Prophage	-	-	MVPEEKGSITLSKDAATIFATAKFKPFQNRIKNNPQKTNPFLKLHENKKS	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_001799349.1	454598	454924	-	109	8.5	10.3156	WP_047526484.1\|HTH_Tnp_1-0-AcrIIA15-3-AcrIIA14\|72.9\|1.2e-20	0.128529736	104	-1.2287781	Not found in Prophage	Not found in Prophage	PHAGE_Paenib_Shelly_NC_041909-gi\|100034\|ref\|YP_009598557.1\|\|6.79e-25	-	MTTRERRSFSSEFKLQKVRLYENGKPKNEIIREYDLTTSTFSNPIKQHQNTGSFNHQDNLKSDEKELIKLRKEVQHLKMENDVLKQILLITRRNRNHLTECVSIFNIH	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_078056058.1	646771	647307	-	179	1.5	7.1443	Acr	0.082962725	178	-1.8093708	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_phiPV83_NC_002486-gi\|9635740\|ref\|NP_061653.1\|\|6.18e-36	-	MGSKSINNREEFGHYEIDTVWSVRPSTYCLLTIIERKTRYLYASRLNTRKSNVVCNEIINIMKPLLPKSITMDRGKEFALFEQIEDELNCSIYFSDLGCPYQRGSIENANGLLRQYYPKGTDFANITQKSLDEAVKQINARPRMIFDYKSSEEMLKYHVSTQNCEPILNDCVRHEPVN	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_000746375.1	647288	647791	-	168	21	10.6116	WP_000746372.1\|HTH_38-2-AcrIIA15\|99.4\|8.9e-90	0.107185677	585	-3.158763	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_phiPV83_NC_002486-gi\|9635740\|ref\|NP_061653.1\|\|4.62e-08	-	MKKRKKRKELDYKTRLAIAKYLNDGLNIIQISKILGRDDAVLYREVNKRSVDGVYNPLLAEEDAIKSRSISDEQVAKRRRLNDETKAYIEEKLSLKWSPRQIASQIEKDTGYYISYPTIYRYIRNGLVKVDVKRDMRQAGKKYNKSSEKRGKLDVGSRVIKYRLKKY	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_001255379.1	647900	648256	-	119	2	8.6724	Acr	0.452053678	20	0.02367568	Not found in Prophage	Not found in Prophage	-	-	MRRWFVLILGLVILLSACGQKYDKEIDEVTKLEKESIQDVKNTKKYKNVERSKSYYKIYNDGEVIIMTYMPFKDSNTKVSRVYKINQTSDKYEEDSNIDAEKFEKDNKPVYEENNMKK	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_000810443.1	648312	648902	-	197	4	9.0969	Acr	0.310270705	796	-3.5373468	Not found in Prophage	Not found in Prophage	-	-	MKQKIIMFTLVTVILFCAVLIGYQIPKQQVKMKQNQIEDLQEEQRILRDKNGELNKLVKRQSKTVISDEEKQIREVSSNFVKQMFEMKKDSSFKSKAPQIKPLVTKDYYDTLFKDSKDKYDLYDDITVNDIHVYFDTYDPKKDSYKVFVQFDERIETDGDDKIEHRQTSAQLDLVRTAEGWRIDNLKRFNLKPLGR	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 3	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_000765703.1	1245570	1245716	+	49	4.5	10.7045	Acr	0.300943055	1006	-3.8872142	Not found in Prophage	Not found in Prophage	-	-	MKLFYIAFLIIIWLNIFLGNEVIHTLTVLITTLYIVNRRKRVKNDRVE	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 3	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_001801391.1	1245673	1245900	+	76	2	9.3579	WP_047558345.1\|HTH_3\|AcrIIA14\|69.2\|5e-23	0.559803025	86	-1.1351999	15	-1.1351999	PHAGE_Staphy_96_NC_007057-gi\|66395937\|ref\|YP_240261.1\|\|1.62e-27	-	MLIEERGLKMTELNEIINAIQSLFESQSGYKISKNSGVPYQTVQDLRNGKTKIEDARFRTIIKLYSYYTSLKEQS	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 4	Low Confidence	Staphylococcus aureus	NZ_CP029653.1	WP_077670291.1	1427785	1428120	+	112	12.5	10.2644	AcrIIA15-1-WP_078064622.1\|HTH_7\|84.1\|2.5e-30	0.120108752	580	-3.1481318	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_187_NC_007047-gi\|66395224\|ref\|YP_239491.1\|\|1.13e-35	-	MSESQKLTYLKELGEDGKYKYVAKIDSKTSKLCHSLNGKIYKVKGMIPGVNASPMHPWRRSTTVPHLGNWRDKFFKEREGKYRVENNTEMKLGEVHYSKTGFHVVPYIKKE	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus

Showing 1 to 10 of 24 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_003193745.1	NZ_CP029653.1	1419161	1419346	+	WP_000006110.1	62	0.307313448	358	-2.549277	71	-2.549277	AcrIIA15\|50.0	MSEYKKKIIELIESNLTGYEISKKTGVSQYVLSQLRQGKREVDNLTLNTTEKLYEYANKVL	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
GCF_003193745.1	NZ_CP029653.1	1417241	1417453	+	WP_001071312.1	71	0.591789943	225	-2.0374956	44	-2.0374956	AcrIIA15\|55.4	MNQFKEIYNTIEKLLNDKSISNYRINQDTGVSYGGISELRSGKRKVNNLTLETAEKLYNYQKQLEIMIED	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
GCF_003193745.1	NZ_CP029653.1	2703237	2703428	-	WP_001224379.1	64	0.607959076	271	-2.2052314	Not found in Prophage	Not found in Prophage	AcrIIA15\|35.5	MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPYIDAERLYHFAMERKSLVTN	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus

Showing 1 to 3 of 3 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003193745.1	NZ_CP029653	NZ_CP029653_1[61276;62170] (evidence-level=4), NZ_CP029653_2[70892;71139] (evidence-level=1), NZ_CP029653_3[690151;690243] (evidence-level=1), NZ_CP029653_4[754881;754980] (evidence-level=1), NZ_CP029653_5[844526;844610] (evidence-level=1), NZ_CP029653_6[974636;974721] (evidence-level=1), NZ_CP029653_7[2083245;2083372] (evidence-level=1), NZ_CP029653_8[2117480;2117564] (evidence-level=1), NZ_CP029653_9[2360741;2360830] (evidence-level=1), NZ_CP029653_10[2438286;2438411] (evidence-level=1), NZ_CP029653_11[2956952;2957035] (evidence-level=1),	11	Nb_arrays_evidence-level_1=10,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIIIA[62243;70757],	1	CAS-TypeIIIA (n=1),