Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003193785.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_001801500.1	324988	325161	+	58	9.5	12.5403	Acr	0.184877092	1995	-5.0442557	253	-5.0442557	-	-	MFLAIIIFLSLFILLTSFFLIIRNFHIIVKFFTKKTYLMLTIRKFRIILGLRKAVTT	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_000854072.1	325158	325421	+	88	2	9.333	WP_029188634.1\|HTH_3-0-AcrIIA1\|60.6\|5.1e-18	0.411502575	777	-3.5545225	129	-3.5545225	PHAGE_Staphy_StauST398_2_NC_021323-gi\|509139885\|ref\|YP_008058771.1\|\|1.29e-57	-	MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIFLGNEYENFVFTNDKKKSIILAFKEKQTS	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 1	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_001148862.1	325437	325634	+	66	-1	5.6399	Acr	0.602691535	293	-2.3366168	61	-2.3366168	PHAGE_Staphy_PVL_NC_002321-gi\|9635200\|ref\|NP_058474.1\|\|3.13e-42	-	MQAQNKKVIYYYYDEEGNRRPVNIQYNDGYDLMIDQRFIEMTLERHPHLKNNFYGLIDGKEFKLD	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_000213811.1	846248	846460	+	71	6.5	10.6555	WP_082410099.1\|HTH_3\|AcrIIA1\|44.8\|8.8e-07	0.302961321	1318	-4.314323	185	-4.314323	PHAGE_Staphy_tp310_2_NC_009762-gi\|156603955\|ref\|YP_001429901.1\|\|1.39e-45	-	MTTSVADKPYLKIKSLIALKGTNQKEVAKAIGMSRSLLSIKINRINGRDFTTSEAKKLADHLNVKVDDFF	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 2	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_000435357.1	846508	846951	+	148	3.5	8.3432	Acr	0.521032226	29	-0.16580665	6	-0.16580665	PHAGE_Staphy_tp310_2_NC_009762-gi\|156603956\|ref\|YP_001429902.1\|\|2.20e-104	-	MEQITLTKEELKEIIAKEVRNAIKGEKPISSGAIFSKVRINNDDLEEINKKLNFAKDLSLGRLRKLNHPIPLKKYQHGFESIHQKAYVQDVHDHIRKLTLSIFGVTLNSDLSESEYNLAAKIYRDIKNYYLYIYEKRVSELTIDDFE	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 3	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_001217295.1	1100941	1101135	-	65	-10	3.8427	Acr	0.738644857	1	1.4064894	Not found in Prophage	Not found in Prophage	-	-	MRIEDAYRKDVIITLLNNEEYEGFVTDYENEFESETGNLVVDIQTDFAVYSFDETEIKSIRLLK	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 3	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_078367461.1	1101146	1101607	-	154	9.5	9.6679	AcrIIA15-1-WP_078064622.1\|HTH_7\|81.8\|1.3e-07	0.141603182	404	-2.705081	Not found in Prophage	Not found in Prophage	PHAGE_Thermu_OH2_NC_021784-gi\|526118333\|ref\|YP_008240330.1\|\|2.46e-08	-	MPHVGSWRDKFFKEREGKYQVEVKEAKLQEKAKNQMKEMIESCKMKIEINCEKQNGHMLGHHLYNENKKRAILNNKKLLSYTILSIDLLNELLREKMSTGNLILSDELFDMKEIINFNQIIGKVHIDNVYIETRKGKVHYSKTGAHIVPYIDK	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 4	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_000956747.1	1103797	1104048	-	84	-8	4.1532	Acr	0.674890981	28	-0.1293838	Not found in Prophage	Not found in Prophage	-	-	MLTLIKLKEDEQVIIYEYIPEDDISNGKGSVTFNKKDAEVIDFSLSEIENEEYFMLYRNKSFSVVRDFIEKQEFPENYKIAWY	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 4	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_001791646.1	1104049	1104222	-	58	9.5	10.3816	AcrIIA15-1-WP_078064622.1\|HTH_7\|66.7\|3e-12	0.344605937	269	-2.2149172	Not found in Prophage	Not found in Prophage	-	-	MATFKRRKNNKKQDLILLRHEALEHYLMNKYNFNYDYAHKIVSKKYDYSIFIKKKVD	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Acr-Aca 4	Low Confidence	Staphylococcus aureus	NZ_CP029681.1	WP_000477492.1	1104177	1104281	-	35	4	10.1892	Acr	0.538471538	106	-1.1956731	Not found in Prophage	Not found in Prophage	-	-	MFKVNYSILSYYPEYNIAVSWQRLREGKTIKNKI	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus

Showing 1 to 10 of 14 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_003193785.1	NZ_CP029681.1	1104792	1104977	-	WP_000006110.1	62	0.307313448	352	-2.549277	Not found in Prophage	Not found in Prophage	AcrIIA15\|50.0	MSEYKKKIIELIESNLTGYEISKKTGVSQYVLSQLRQGKREVDNLTLNTTEKLYEYANKVL	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
GCF_003193785.1	NZ_CP029681.1	1106715	1106939	-	WP_001789892.1	75	0.577424357	206	-1.9416039	45	-1.9416039	AcrIIA15\|53.6	MTKIMNQFKEIYNTIEKLLNDKSISNYRINQDTDVSYGGISELRSGKRKVNNLTLETAEKLYNYQKQLEIMIED	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
GCF_003193785.1	NZ_CP029681.1	2684032	2684223	+	WP_001224379.1	64	0.607959076	265	-2.2052314	Not found in Prophage	Not found in Prophage	AcrIIA15\|35.5	MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPYIDAERLYHFAMERKSLVTN	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus

Showing 1 to 3 of 3 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003193785.1	NZ_CP029681	NZ_CP029681_1[427494;427574] (evidence-level=1), NZ_CP029681_2[1275845;1275930] (evidence-level=1), NZ_CP029681_3[1298676;1298767] (evidence-level=1), NZ_CP029681_4[1496043;1496121] (evidence-level=1), NZ_CP029681_5[1592543;1592620] (evidence-level=1), NZ_CP029681_6[2009840;2009942] (evidence-level=1), NZ_CP029681_7[2150280;2150370] (evidence-level=1), NZ_CP029681_8[2351273;2351520] (evidence-level=1), NZ_CP029681_9[2360243;2361133] (evidence-level=4), NZ_CP029681_10[2753191;2753288] (evidence-level=1),	10	Nb_arrays_evidence-level_1=9,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIIIA[2351655;2360169],	1	CAS-TypeIIIA (n=1),