| Loci ID | Classification | Organism | Refseq ID | Protein ID | Start | End | Strand | aa Length | Charge | Isoelectric Point | Acr/Aca | PaCRISPR_score | AcRanker Rank | AcRanker Score | AcRanker Rank Prophage | AcRanker Score Prophage | MGE/Propahge Metadata | Acr_Hit | sequence | Self Target w/in 5000 BP | Self Target Outside 5000 BP | lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
|---|
Loci ID | Classification | Organism | Refseq ID | Protein ID | Start | End | Strand | aa Length | Charge | Isoelectric Point | Acr/Aca | PaCRISPR_score | AcRanker Rank | AcRanker Score | AcRanker Rank Prophage | AcRanker Score Prophage | MGE/Propahge Metadata | Acr_Hit | sequence | Self Target w/in 5000 BP | Self Target Outside 5000 BP | lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Acr-Aca 1 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_003115353.1 | 721917 | 722393 | + | 159 | 7.5 | 10.0073 | Acr | 0.173441836 | 396 | -3.9307847 | Not found in Prophage | Not found in Prophage | PHAGE_Clostr_phiCD146_NC_028958-gi|971820190|ref|YP_009214163.1||0.002 | - | MVYVVRKRCLFRAGERLFGLRGLTGLNRPQFSEVVGMDPKRLENIESGRQRMHDEDFEKVCGTFPEFSDWIAYEGSIEPQSIAWKIAEAAQEAAVYLVERNPELLELHGLDVPAWREKHREILKKVRKRELSPPPEKPPKPRRKRKPRSNLPTPTDGT | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 1 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_003143634.1 | 721403 | 721879 | + | 159 | -0.5 | 6.2676 | 3300010401_____Ga0134121_10000154_103|HTH_3|AcrIIA1|40.9|0.00018 | 0.239018622 | 1692 | -5.108919 | Not found in Prophage | Not found in Prophage | PHAGE_Brevib_Jimmer2_NC_041976-gi|100061|ref|YP_009606488.1||0.006 | - | MVKNRRLFTAGKRLRALRELMGLSRPQFAELVGMTAKRLENIENELQRMHDEDFEKVCGTFPEFSDWIAYEGSIEPQSIAWKVADSAQAAAVYLVERNPVLLEQHGIDMQAWRERHREIREALLAAEQAPEAEPAPLEEPPEPRRQRKRKTPASGKGD | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 10 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_003161707.1 | 6582240 | 6582446 | - | 69 | 0 | 6.3079 | WP_031577006.1|HTH_3-1-AcrIIA1|51.7|9.3e-13 | 0.14692347 | 1442 | -4.9950347 | Not found in Prophage | Not found in Prophage | PHAGE_Bacill_Pascal_NC_027372-gi|100027|ref|YP_009151495.1||8.86e-09 | - | MRNRIRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 10 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_003093356.1 | 6582443 | 6582817 | - | 125 | 6 | 10.3087 | Acr | 0.099701222 | 4289 | -5.689351 | Not found in Prophage | Not found in Prophage | - | - | MTHKRFFLELLLALVGYAAAVLISGQLLAGTEPGAGRVFLALLPVPPMVALALVVIRYLRRLDEMARRIHLEALALAFVGTALLTFAYGFLETTGFPKLSMFFVWPLMGAFWAIGCVLGLRRYA | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 2 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_021264232.1 | 1356593 | 1356934 | - | 114 | -4 | 5.4436 | Acr | 0.308260214 | 80 | -2.5705914 | Not found in Prophage | Not found in Prophage | - | - | MSQHYFETHHKGLPITVMLGWDRPLRYFFMTIRKPAELIDSTMKVEDEDFLYSNLHEEDPFGHGLDYYRAVLGHFHIDVPSSMFTEVQKDYAGNVSNRVVKHEADGSFTELSA | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 2 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_021264233.1 | 1357011 | 1357418 | - | 136 | 2 | 7.2885 | Acr | 0.117591049 | 228 | -3.4988396 | Not found in Prophage | Not found in Prophage | PHAGE_Klebsi_vB_KpnM_KB57_NC_028659-gi|966203501|ref|YP_009187818.1||3.77e-06 | - | MGWYFSSQSRSDLIAELVAPQETERVSAKVIAHTLRGNVLWSVIEMTAKVEGVHRDLSQGQSLRYIRCDLLECSGGQWGYKPLDESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARRRTPTAALASATALTA | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 2 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_021264234.1 | 1357518 | 1357841 | - | 108 | -8 | 4.2911 | WP_123180831.1|HTH_32-0-AcrIF12|39.5|3.7e-13 | 0.143328209 | 449 | -4.0429916 | Not found in Prophage | Not found in Prophage | - | - | MSTIACDTPRSTLDEPAWQAVCKTAAEHAQRGCGLAWEHWVTLFSSEIDAQVSRLPESQRAHALEIATEEWDYATPAERQETQEWLAENGCCSHGITLGCCPAGCGS | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 3 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_079381187.1 | 1449966 | 1450157 | + | 64 | 7 | 10.2397 | Acr | 0.207606807 | 229 | -3.5014596 | 35 | -3.5014596 | - | - | MYGCVFPPKHGTAKTGPCFRAEARMRKPSNPYMHGNAEAELSRSGKARMWIPDSVGIRPCGFP | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 3 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_033942159.1 | 1450240 | 1450530 | + | 97 | 3 | 9.412 | AcrIIA1-1-WP_008683823.1|HTH_3|48.3|3.5e-09 | 0.115553318 | 723 | -4.4460464 | 99 | -4.4460464 | PHAGE_Brevib_Jimmer2_NC_041976-gi|100059|ref|YP_009606486.1||4.42e-11 | - | MQKRSVQPGRPAGATTFDAELATAFGAAVRALRSERGIAQESLANLAGIERSHMGKVERGEHMPTLAIIFKIAGALGCSTATLMAATEAQLAAPAT | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |
| Acr-Aca 4 | Medium Confidence | Pseudomonas aeruginosa | NZ_CP029707.1 | WP_003122724.1 | 1821047 | 1821628 | - | 194 | 0 | 6.4913 | WP_022747448.1|HTH_3|AcrIIA1|35.8|6.1e-30 | 0.080735318 | 2631 | -5.400122 | Not found in Prophage | Not found in Prophage | PHAGE_Thermo_THSA_485A_NC_018264-gi|397912660|ref|YP_006546324.1||8.16e-07 | - | MHTEPDDLIGQRVAHNLLRLRGKRNLSLDALARISGVSRAMLAQIESGRSVPSIKVLCKIAQGLKVSVAAFLDDRAFAGVAVLPAQQSKRLVSADGAFTSRALFPFDVARQVEFYELRLRGLGQEDAEAHAPGTQENLVVAQGVLEVRVNEERFLLATGDSILFYADQPHSYRNPADSEALAYLVMTYPERLD | No | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa |
| GCF | NC ID | Start | End | Strand | Protein ID | aa Length | PaCRISPR_score | AcRanker Rank | AcRanker Score | AcRanker Rank Prophage | AcRanker Score Prophage | Acr_Hit|pident | sequence | lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
|---|
GCF | NC ID | Start | End | Strand | Protein ID | aa Length | PaCRISPR_score | AcRanker Rank | AcRanker Score | AcRanker Rank Prophage | AcRanker Score Prophage | Acr_Hit|pident | sequence | lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GCF_003206535.1 | NZ_CP029707.1 | 4208403 | 4208795 | + | WP_031635407.1 | 131 | 0.883611386 | 7 | -0.6424756 | Not found in Prophage | Not found in Prophage | AcrIF3|42.5 | MDENYIIARSIKEANKFIQTWEEADIEKLTDDQTRAAIGFASKINSELREWIRMHLDGEGTAHEEGYLKEQQAPWKKANTGDLFTDFGWWHRIANLMLHTAYINHAMLGGDRYHSRLMEIFRDRFSYPEE | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa |
| GCF_003206535.1 | NZ_CP029707.1 | 4208814 | 4209137 | + | WP_003158159.1 | 108 | 0.722359942 | 114 | -2.8666308 | Not found in Prophage | Not found in Prophage | AcrIE1|62.1 | MSNQQKNFGDAQVALVAAWRKHPELRESLDGVVSEVLSQIVFQTEMLSKQAEGLARYVRRTHSDEDEVVRVLCYNIDIQINRIISICGEVNQHGIRVYGDAIDRDVD | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa |
| GCF_003206535.1 | NZ_CP029707.1 | 4206970 | 4207344 | + | WP_003158163.1 | 125 | 0.850113627 | 19 | -1.5265639 | Not found in Prophage | Not found in Prophage | AcrIF12|100.0 | MAYEKTWHRDYAAESLKRAETSRWTQDANLEWTQLALECAQVVHLARQVGEELGNEKIIGIADTVLSTIEAHSQATYRRPCYKRITTAQTHLLAVTLLERFGSARRVANAVWQLTDDEIDQAKA | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa |
| GCF | NC_ID | CRISPR arrays | Nb CRISPRs | Evidence levels | Cas clusters | Nb Cas | Cas Types/ Subtyes |
|---|---|---|---|---|---|---|---|
| GCF_003206535.1 | NZ_CP029707 | NZ_CP029707_1[103426;104353] (evidence-level=4), NZ_CP029707_2[1655034;1656438] (evidence-level=4), NZ_CP029707_3[1664964;1666612] (evidence-level=4), NZ_CP029707_4[3923609;3923697] (evidence-level=1), NZ_CP029707_5[4627329;4627423] (evidence-level=1), NZ_CP029707_6[5913359;5913472] (evidence-level=1), | 6 | Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3 | CAS-TypeIF[1656563;1664702], | 1 | CAS-TypeIF (n=1), |