Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003584645.1 (Total 10 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119628163.1	413386	413853	-	156	16.5	11.4103	WP_104898562.1\|HTH_33-1-AcrIIA15\|34.2\|7.3e-09	0.057392084	1592	-5.035672	Not found in Prophage	Not found in Prophage	-	-	MKAYSLDLRIRMFSYALTHSVRKTAALFRVSPNTVHVLKKLFIETGQLAPKPSHAGRPRAISAEGELYLQALLREEVDLTLEELRERYADTYGVTVSVGTMFNTLRRLRITRKKSPPTIPRRTARSIKPKPSTITTSSMPSPSTSASTSMKPVPV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 1	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119628162.1	412901	413383	-	161	2.5	6.9853	Acr	0.096572597	1061	-4.6556735	Not found in Prophage	Not found in Prophage	-	-	MTLPYGRAPRGERVIDEQPVSPGETVNTVAVLTEHGLDAQWSDQGPLTAERFVAYLDVSVLPLLLAGKTLILDRHPVHRARAVRAFLDRHHVRYVYLPPYSPELNPSEEAWSKVKHVLKREKPRTVDHLLDILHRAAQSITPNDAQGYFQHAEDFSLVTV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 10	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119632540.1	6085859	6086104	+	82	5.5	10.5822	WP_104898562.1\|HTH_33-1-AcrIIA15\|41.3\|0.00093	0.143627903	596	-4.134155	Not found in Prophage	Not found in Prophage	-	-	MTVRTGKAKLAPRPHAGGPPRCLDETDERLIRQCLEQQPDLTLDELRETLAQQNGKSVSRATLGRVVQRLNLPRKKDSSRD	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 10	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119632541.1	6086174	6086686	+	171	7.5	9.1935	Acr	0.078154898	4352	-5.806855	Not found in Prophage	Not found in Prophage	-	-	MPACHRRIRHSLGLTRRYGRAAPGIRGEDTVPFNPGPHVSVIGALSCRGIGAVMSIEGATDGPVFLAYVRQVLAPTLAEGDVVVMDNLSAHKVAGVREAIEAKGAKVLYLSPYSPDFSPIEPCWSKIKTALRAAKARTREALDEALAAALATITPLDARNWFTSCGYALH	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 2	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119628462.1	828893	829342	-	150	-5	4.7264	NZ_CP014855.1_1139\|HTH_3\|AcrIIA15\|32.1\|5.3e-05	0.149052026	725	-4.3070717	Not found in Prophage	Not found in Prophage	-	-	MEVKEIMTPNPVCCTPDTGLEGVARMMVQHDCGEIPVVENEESMRLVGVVTDRDIVCRSLAQGKDPMSMRTRECMSSPCVTVTPETSLEECCKIMEEHRIRRVPVADQGGRCCGMVSQADIARRAPTQQTAEVVKEVSQPKATAEPVIA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 2	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119628463.1	829487	829783	-	99	12	11.5785	Acr	0.142477325	2125	-5.260895	Not found in Prophage	Not found in Prophage	-	-	MALRKRRLCHHPELIQRLLDAADVIYLDPHADRAKLNRVLDLVERLQRRNPLTAPPRHFHHGVARPRGPSMAAKDGNCSETVLSGQPAEPVARRKRAL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 3	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119629883.1	2813378	2813728	+	117	3	9.3415	WP_104872477.1\|HTH_34-0-AcrIE2\|31.6\|0.0084	0.403771866	1216	-4.801499	Not found in Prophage	Not found in Prophage	-	-	MPDAMHDPTPVKLSLTETVIAELLRQSAKPLFGLELVRRSPPGELQLKKGTIYVTLERMEKKGLVTSELETAPPSHVKEGDFYIPRRMYRLTSRGLDALAATKAMLGQYYDFLLGS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 3	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119629884.1	2813730	2814152	+	141	2	7.866	Acr	0.330975411	4909	-5.925351	Not found in Prophage	Not found in Prophage	-	-	MKPVCSRSDRLLEHLDRGVLLMAVGGVIFNGMEGSLAGMALTALAAAIYGLTRNRIANLDGFEGFESVAPRFAPPGVDLARFTLICQWLGSRQIFEGLLGDLVDPEIGATETTARRHIRSALWPALAGRLRDKIVSLLSP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 4	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119630198.1	3227348	3227818	-	157	3	7.1843	Acr	0.103577934	1458	-4.949848	Not found in Prophage	Not found in Prophage	-	-	MTLPYGRAPRGKRVIDEQPVSPGDTVNTVAVLTEQGLDAQWCYQGPLTAERFVAYLDVYVLPLLLAGKTLILDRHPVHQARAVRAFLDRHHVHYVYLPPYSPELNPSEEAWSKVKHVLKREKPRTVDHLLDILHRATQSITPNDAQGYFQQAEDFL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum
Acr-Aca 4	Low Confidence	Methylocaldum marinum	NZ_AP017928.1	WP_119630199.1	3227821	3228288	-	156	16.5	11.4103	WP_104898562.1\|HTH_33-1-AcrIIA15\|34.2\|5.6e-09	0.055010694	1526	-5.0022206	Not found in Prophage	Not found in Prophage	-	-	MKAYSLDLRMRMFSYALTHSVRKTAALFRVSPNTVHVLKKLFIETGQLAPKPSHAGRPRAISAEGELYLQALLREEVDLTLEELRERYADTYGVTVSVGTMFNTLRRLRITRKKSPPTIPRRTARSIKPKPSTITTSSMPSPSTSASTSMKPVPV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum

Showing 1 to 10 of 20 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_003584645.1	NZ_AP017928.1	6014307	6014933	+	WP_119632494.1	209	0.136195389	4656	-5.86936	Not found in Prophage	Not found in Prophage	AcrIF1\|50.0	MRAGTAVRYPVSGGRHLAVQSLFALFAGFVGFLAISFYLSNRLETQMASPAAGHARINAISQQMETLQRKFGVLLAESVEMRLKDLQKSIEAGTISAADLETFERLRSDLAILEGYAEAGGANAFDSAEIEHSRFRPLPGSGLVRNEELMDEVVKVKNLLYFCAASLATTTVLISGYWLRQRSRTHRIQSRMAAVPMLARKTGGDSGD	Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylocaldum; Methylocaldum marinum

Showing 1 to 1 of 1 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003584645.1	NZ_AP017928	NZ_AP017928_1[671796;672022] (evidence-level=1), NZ_AP017928_2[942123;942227] (evidence-level=1), NZ_AP017928_3[946221;946323] (evidence-level=1), NZ_AP017928_4[1541208;1541434] (evidence-level=1), NZ_AP017928_5[2336873;2337631] (evidence-level=4), NZ_AP017928_6[2429926;2430039] (evidence-level=1), NZ_AP017928_7[2434084;2434197] (evidence-level=1), NZ_AP017928_8[3377485;3377618] (evidence-level=1), NZ_AP017928_9[3813934;3814043] (evidence-level=1), NZ_AP017928_10[3861758;3861868] (evidence-level=1), NZ_AP017928_11[4478397;4478717] (evidence-level=3), NZ_AP017928_12[4480136;4480661] (evidence-level=4), NZ_AP017928_13[4901533;4901644] (evidence-level=1), NZ_AP017928_14[4908793;4908904] (evidence-level=1), NZ_AP017928_15[4920446;4924199] (evidence-level=4), NZ_AP017928_16[5280383;5280504] (evidence-level=1), NZ_AP017928_17[5939793;5940520] (evidence-level=4), NZ_AP017928_18[5944760;5944852] (evidence-level=1), NZ_AP017928_19[5954394;5955548] (evidence-level=4), NZ_AP017928_20[5956635;5956956] (evidence-level=4),	20	Nb_arrays_evidence-level_1=13,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=1,Nb_arrays_evidence-level_4=6	CAS-TypeIC[2328792;2336682], CAS-TypeIIIB[4480766;4487844], CAS-TypeIE[4924303;4933180], CAS-TypeIIIA[5931553;5950166],	4	CAS-TypeIC (n=1), CAS-TypeIE (n=1), CAS-TypeIIIA (n=1), CAS-TypeIIIB (n=1),