Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003956485.1 (Total 9 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_001191669.1	1162737	1162997	-	87	3	10.085	WP_098846178.1\|HTH_3\|AcrIIA1\|31.5\|0.00092	0.170886865	707	-3.9922023	126	-3.9922023	PHAGE_Entero_mEp460_NC_019716-gi\|428782355\|ref\|YP_007112113.1\|\|8.57e-59	-	MQSPLRNVRKAHGFTLQHVAAGVQVNPATLSRIERLEQIPSIDLAERLANFFKGEISEMQILYPARFQSSQNQNGFKPQEQEVSRG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_001347307.1	1162969	1163121	-	51	2.5	8.1177	Acr	0.21070428	254	-3.0915906	43	-3.0915906	-	-	MSDSVSYVHAFITFLYCALSKSTCAKYLREIICSSRNMWRSYAITITECA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_046660207.1	1162187	1162744	-	186	-9.5	4.4854	Acr	0.13258814	633	-3.900672	112	-3.900672	PHAGE_Shigel_SfII_NC_021857-gi\|526244673\|ref\|YP_008318517.1\|\|7.90e-129	-	MGNHHWKVEKQPEWYVKAVRKTIAALPGGYAEAAEWLDVTENALFNRLRADGDQIFPLGWAMILQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_004200782.1	1652405	1652611	+	69	3	10.4584	AcrIIA13-0-WP_006662529.1\|HTH_17\|33.3\|3.7e-08	0.148580391	912	-4.228349	Not found in Prophage	Not found in Prophage	PHAGE_Stenot_S1_NC_011589-gi\|213163928\|ref\|YP_002321480.1\|\|5.49e-13	-	MNTTNQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGIRAVAFVESEVDEWILSVIETNRIKVA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_001399628.1	1652633	1652947	+	105	-7.5	4.207	Acr	0.837842846	57	-1.8339906	Not found in Prophage	Not found in Prophage	-	-	MNIEEFMNEENHMCNLGEDLFCKIFEPGAIYDLPNSDFNKEIIYWLSQYLVGNLRQPLDAISELDIFEQFYVYETWFSLIKCPDEIRNLSKRIIRYQIGLKTIL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_000356397.1	2115186	2115476	-	97	5	10.8907	AcrIIA15-1-WP_133418514.1\|HTH_19-1-AcrIIA15\|37.5\|5.7e-09	0.132240546	1532	-4.7215943	Not found in Prophage	Not found in Prophage	PHAGE_Escher_P2_NC_041848-gi\|100002\|ref\|YP_009591415.1\|\|6.53e-07	-	MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRASGLSQSKFADLISVSVDTLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_000897305.1	2115477	2115788	-	104	4	9.7791	Acr	0.176388033	556	-3.7677894	Not found in Prophage	Not found in Prophage	-	-	MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_001170556.1	3151924	3152496	-	191	7	7.8667	Acr	0.36495931	822	-4.1403494	Not found in Prophage	Not found in Prophage	-	-	MQKLENRCDLLLIQHQKWMASVTRFIVAHGMGSPHLHGYHRLTLAHFFLPEKGTIISVAPQGLYQVVNPGTPPFLPAIQEGLMTSIQTHEIMLLTHFNLGGVLLSELHRLGESRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCARSMQPWTEELKHKSHAELERWAVARKREKRELELMIDEYLLYAC	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_077627221.1	3152582	3152929	-	116	2	8.918	AcrIIA13-0-WP_006662529.1\|HTH_17\|74.2\|1.1e-25	0.113773994	1071	-4.380144	Not found in Prophage	Not found in Prophage	PHAGE_Entero_P4_NC_001609-gi\|9627517\|ref\|NP_042041.1\|\|1.38e-08	-	MLPVYLPAGTFPYSFFTFLPGCYAGEGGASFSSPTPVEINNIRRNIFMNTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQSRP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Low Confidence	Escherichia coli	NZ_CP025916.1	WP_001303621.1	3629384	3629539	+	52	6.5	10.731	Acr	0.29011738	1795	-4.875452	Not found in Prophage	Not found in Prophage	-	-	MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFGLGRLYLG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 19 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003956485.1	NZ_CP025916	NZ_CP025916_1[294990;295081] (evidence-level=1), NZ_CP025916_2[610739;610884] (evidence-level=1), NZ_CP025916_3[850310;850406] (evidence-level=1), NZ_CP025916_4[2970664;2970781] (evidence-level=1), NZ_CP025916_5[3400523;3401039] (evidence-level=4), NZ_CP025916_6[3426884;3427156] (evidence-level=3), NZ_CP025916_7[4617595;4617718] (evidence-level=1),	7	Nb_arrays_evidence-level_1=5,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=1,Nb_arrays_evidence-level_4=1	CAS-TypeIE[3418085;3426787],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries