Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004088295.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_001295364.1	1221705	1222280	+	192	-2.5	5.1335	WP_049578512.1\|HTH_AsnC-type\|AcrIE1\|36.4\|2.1e-24	0.126726755	930	-4.3411236	Not found in Prophage	Not found in Prophage	PHAGE_Rhizob_vB_RleM_P10VF_NC_025429-gi\|712913000\|ref\|YP_009099832.1\|\|3.04e-09	-	MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_001303621.1	1221553	1221708	+	52	6.5	10.731	Acr	0.29011738	1613	-4.875452	Not found in Prophage	Not found in Prophage	-	-	MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFGLGRLYLG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_000826503.1	1404129	1404521	-	131	1.5	7.826	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.005	0.277827018	523	-3.7723608	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_000472021.1	1404523	1404882	-	120	4.5	10.2523	Acr	0.267907337	2706	-5.3749795	Not found in Prophage	Not found in Prophage	-	-	MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_012135909.1	1871300	1871578	-	93	6	10.7986	AcrIIA13-0-WP_006662529.1\|HTH_17\|71.4\|6.7e-24	0.174286712	2491	-5.2931204	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|2.99e-08	-	MPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDMAFITQLNGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQPRP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP035123.1	WP_001384652.1	1871547	1871705	-	53	4	9.8249	Acr	0.161747869	885	-4.2872396	Not found in Prophage	Not found in Prophage	-	-	MRAEASFRNNHPVYRYGSATATSPFISWRSHSRLFFTFLPGCYAGEGGALFS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP035124.1	WP_013023815.1	42893	43105	-	71	3	8.9244	Acr	0.48195309	555	-3.832738	Not found in Prophage	Not found in Prophage	-	-	MKVYGNQHSSEAFFRETSPSCFEPKAEKVIAFHGKDASYAYNVLADLKAAGASYTRRNIIADMFRRLGVE	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP035124.1	WP_013023813.1	43519	43644	-	42	7	11.8222	Acr	0.169963367	1497	-4.7958827	Not found in Prophage	Not found in Prophage	-	-	MKVLSRGQVQQVPAQSQNRGPGNSTGDGFKRQKKQIKEKAG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP035124.1	WP_013023814.1	43166	43522	-	119	0.5	6.7128	Acr	0.474670608	841	-4.229693	Not found in Prophage	Not found in Prophage	-	-	MSTQNVNVKPSTKESTTLRTDGFVRNIHSRNPFDVIRADVVLERIEKKAGRSCGMHYELYQAHLLGGALDYLDALPLKDRPVLMGAAAKRGYLLTLAEEERALEARDVLMSELAANDC	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP035124.1	WP_004152719.1	42658	42882	-	75	1	7.201	Acr	0.522185019	2120	-5.133832	Not found in Prophage	Not found in Prophage	-	-	MEHVKGKIQQGAGNAYFAGMQWRGITLGHADAAALNQFDIDISKAQAPEARTWLLQNKAEFIALILGIEVVKVG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

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1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004088295.1	NZ_CP035123	NZ_CP035123_1[668728;668845] (evidence-level=1), NZ_CP035123_2[1042955;1043471] (evidence-level=4), NZ_CP035123_3[1065855;1066433] (evidence-level=4), NZ_CP035123_4[1567752;1567869] (evidence-level=1), NZ_CP035123_5[2256213;2256336] (evidence-level=1), NZ_CP035123_6[2910070;2910161] (evidence-level=1), NZ_CP035123_7[3218911;3219055] (evidence-level=1), NZ_CP035123_8[3741818;3741971] (evidence-level=1), NZ_CP035123_9[3930022;3930137] (evidence-level=1),	9	Nb_arrays_evidence-level_1=7,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[1060514;1065759],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries