Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004135105.1 (Total 4 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035458.1	WP_086368100.1	759274	759636	-	121	-1	6.0879	AcrIIA15-0-WP_111671891.1\|HTH_3\|31.4\|0.0011	0.152841918	526	-3.9213042	Not found in Prophage	Not found in Prophage	-	-	MKNAINLKDKLKIFSDFWSPRVISELNDYQVKLAKFKGEFAWHDHKDTDELFLVISGSMKIQFKDGFVDLKEGEMYIVPKMALHRPIADNECHVMIIEPRGVINTGDADSKLKADNDIWI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 1	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035458.1	WP_086368099.1	759649	759987	-	113	3.5	7.912	Acr	0.546782953	439	-3.7530599	Not found in Prophage	Not found in Prophage	-	-	MLNKILGEISKNTFRKTVLSTYVILCKDYKDETYYKMQGRTLDNLAHELNIVRPYLRDVIDAMISAHMIEKVINYEGETAYKAFHIHPIILDTKNDLELRGRCNTLLHSVGI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 2	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035459.1	WP_086368794.1	40527	40802	-	92	2.5	8.9869	AcrIF11-0-WP_086368794.1\|HTH_31\|100.0\|1e-47	0.137784382	427	-3.7329717	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Stx_NC_029120-gi\|985761268\|ref\|YP_009226853.1\|\|7.75e-20	-	MNLSALKRKALQNPEVKEAYDDLSIEFELINSLISMREKSGLTQDEVAEKMGTKAPNISRLESGRSNPSLKTLVSYAQACGFKLNIGFKHA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 2	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035459.1	WP_086368793.1	40799	40978	-	60	7.5	10.5907	Acr	0.159417962	125	-2.553091	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Stx_NC_029120-gi\|985761269\|ref\|YP_009226854.1\|\|5.05e-13	-	MGDGLFEIRAKAQEGIGRGLFCYLKGQHVYVLRAFVKKANKTQKKEIELARERMKEVKL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 3	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035460.1	WP_086368583.1	35227	35448	+	74	8.5	10.8321	SRS2563885\|NODE_108624_length_393_cov_0.958580_1\|HTH_Tnp_4\|AcrIIA14\|47.4\|3e-05	0.145346601	291	-3.3204553	Not found in Prophage	Not found in Prophage	PROPHAGE_Neisse_MC58-gi\|15677611\|ref\|NP_274770.1\|\|7.49e-05	-	MSYQQLTEGQRYQIFTLLAEGYSQSAIAKRVSVHRSTICRELKRNSDDSRYRPDRANTLSVQRRSQASKYRIS	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 3	Medium Confidence	Photobacterium damselae subsp. damselae	NZ_CP035460.1	WP_086368584.1	35470	35853	+	128	13.5	10.7916	Acr	0.109556213	1845	-5.081654	169	-5.081654	PROPHAGE_Neisse_MC58-gi\|15677611\|ref\|NP_274770.1\|\|1.57e-18	-	MVLGWDWSPEQISAIAKRIDLPVSPEWIYQHIARNKAQGGLLYKHLRQGHKRYRRGKHTVRKSIVNSVSIDERPAIVDTRERLGDWEADTVLGKQGTGVLVTLAERKSKLYLVKRVHSVTDHAKLIH	No		Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 4	High Confidence	Photobacterium damselae subsp. damselae	NZ_CP035461.1	WP_086368743.1	35770	36315	+	182	15	9.9913	AcrIIA13\|AcrIIA14\|AcrIIA15\|Aca8\|WP_050337584.1\|43.2\|1e-05	0.458506885	1049	-4.5385303	Not found in Prophage	Not found in Prophage	-	-	MNTRSKIATQFYTSEHADRSVQIGLAGREVASEGVMSKEHAPHRLSSLDVSQAPALRAPCASHISRANARKAAIFKRAWALAAQKALRFGGEKCTYFAACLKVVYRQIKLTHTESRQQYGELMKINNEYLNQLKEELIHYEHNPCLPHREQTIADLLPRIQKARVRQSYYVDLIFCAGVKL			Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 4	High Confidence	Photobacterium damselae subsp. damselae	NZ_CP035461.1	WP_086368742.1	36312	36560	+	83	3	8.8532	Acr	0.623362087	551	-3.968153	Not found in Prophage	Not found in Prophage	-	-	MSAFGYYNAIRFEEREIVPPMSQREIAKLVIQYHIKDIKAYLRGEETKESAKSSFIELQSIGLTPYEIAKHAKCRLKDLIFA			Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae
Acr-Aca 4	High Confidence	Photobacterium damselae subsp. damselae	NZ_CP035461.1	WP_086368741.1	36632	36934	+	101	-4	4.5836	Acr	0.182058067	353	-3.5623798	Not found in Prophage	Not found in Prophage	-	-	MIKPSQDENITPKAFTLGALVITRGVDAFLDGNYGALFPMINRHINCDWGDCSKEDAISNNWATHRGERIISSYELQGEKIWIITEWDRSVTTILFPYEY			Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium damselae

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1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004135105.1	NZ_CP035458	NZ_CP035458_1[863876;864024] (evidence-level=1), NZ_CP035458_2[874484;874931] (evidence-level=4),	2	Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIF[864162;872303],	1	CAS-TypeIF (n=1),

Showing 1 to 1 of 1 entries