Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004801575.1 (Total 5 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000273128.1	608816	609136	+	107	2.5	8.8194	Acr	0.166971794	434	-3.642396	91	-3.642396	PHAGE_Klebsi_phiKO2_NC_005857-gi\|46402135\|ref\|YP_006629.1\|\|6.01e-27	-	MYELLFHPEAESEIYDLEPIMQAKVLKGLEKLEAKGPELRYPDTGIIQDGLFELRVGRKDISRTFFAYAKGRKIYILRTFIKKTPKTPKAEIALATSRWEELKDGC	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000268704.1	609126	609410	+	95	5.5	10.2152	AcrIF11-0-WP_086368794.1\|HTH_31\|44.9\|1.7e-17	0.130524798	520	-3.7893767	107	-3.7893767	PHAGE_Entero_N15_NC_001901-gi\|9630515\|ref\|NP_046944.1\|\|8.36e-22	-	MAVKGIKFSEVKAKALANPDVKKAYDEATQEEELRAVLIEMKKRAGLTSTEIAARMGVSQPAVSRLERNVSSASLTTLQRYAAACGMHIKLSLQ	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000071896.1	2956088	2956624	+	179	17.5	10.9681	AcrIF14-0-WP_083499357.1\|HTH_Tnp_ISL3\|51.2\|6e-06	0.082267767	2119	-5.1702847	358	-5.1702847	PHAGE_Brevib_Jenst_NC_028805-gi\|971744895\|ref\|YP_009199114.1\|\|1.00e-06	-	MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000497519.1	2956739	2957065	+	109	12	10.388	AcrIF14-0-WP_083499357.1\|HTH_Tnp_ISL3\|56.6\|3.6e-27	0.165918726	1341	-4.735373	247	-4.735373	PHAGE_Brevib_Jenst_NC_028805-gi\|971744895\|ref\|YP_009199114.1\|\|1.68e-11	-	MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_001303621.1	4175786	4175941	+	52	6.5	10.731	Acr	0.29011738	1534	-4.875452	Not found in Prophage	Not found in Prophage	-	-	MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFGLGRLYLG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_001295364.1	4175938	4176513	+	192	-2.5	5.1335	WP_049578512.1\|HTH_AsnC-type\|AcrIE1\|36.4\|2.2e-24	0.126726755	907	-4.3411236	Not found in Prophage	Not found in Prophage	PHAGE_Rhizob_vB_RleM_P10VF_NC_025429-gi\|712913000\|ref\|YP_009099832.1\|\|3.04e-09	-	MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000826513.1	4359578	4359970	-	131	1.5	7.826	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0052	0.29244594	540	-3.8301845	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_EW_NC_007056-gi\|66395860\|ref\|YP_240188.1\|\|0.004	-	MKRLRNKMTTEELAECLGVTKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP039298.1	WP_000472021.1	4359972	4360331	-	120	4.5	10.2523	Acr	0.267907337	2642	-5.3749795	Not found in Prophage	Not found in Prophage	-	-	MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Low Confidence	Escherichia coli	NZ_CP039299.1	WP_000148285.1	46043	46294	-	84	1	7.2062	AcrIF11\|Aca6\|WP_063139755.1\|46.7\|6.7e-05	0.292846891	111	-2.5180871	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_PEp14_NC_016767-gi\|374531851\|ref\|YP_005098406.1\|\|6.88e-07	-	MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAEDV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Low Confidence	Escherichia coli	NZ_CP039299.1	WP_001412266.1	46328	46525	-	66	10.5	11.2341	Acr	0.191177864	959	-4.3927794	Not found in Prophage	Not found in Prophage	-	-	MQGAPHPARLKKNDGATMACGGHWHTTPAQVKTEKTARHLQSKKVKFLHFFTLIFRADLVVMVIK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 10 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004801575.1	NZ_CP039298	NZ_CP039298_1[456506;456629] (evidence-level=1), NZ_CP039298_2[1149146;1149237] (evidence-level=1), NZ_CP039298_3[1292814;1292897] (evidence-level=1), NZ_CP039298_4[1413832;1413976] (evidence-level=1), NZ_CP039298_5[1656755;1656851] (evidence-level=1), NZ_CP039298_6[2175747;2175888] (evidence-level=1), NZ_CP039298_7[3993466;3994043] (evidence-level=4), NZ_CP039298_8[4019594;4020598] (evidence-level=4), NZ_CP039298_9[4561118;4561235] (evidence-level=1),	9	Nb_arrays_evidence-level_1=7,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[4010838;4019488],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries