Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004919145.1 (Total 9 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_033572416.1	376279	376779	-	167	10.5	10.2425	3300005613_____Ga0074649_1000348_63\|HTH_Tnp_4-3-AcrVA1\|31.1\|0.00032	0.096474469	93	-2.2930706	18	-2.2930706	PHAGE_Xantho_Xop411_NC_009543-gi\|148727219\|ref\|YP_001285711.1\|\|1.85e-40	-	MNSADLSKILEYEPSTGVFRWNKSKGTALAGDVAGSVNHHGYREITIDGKKLQANRLAWLFVTGMFPNGVIDHINRVRDDNRFSNLRDISVAENNLNKSIRLDNKSGTSGVNWDIKREKWRATGQINRKQKHLGYFKNIDGAIDARRIFCRKYHLTSKEYADEVTE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_033572415.1	375958	376245	-	96	1	7.1344	Acr	0.14263765	1036	-4.395736	197	-4.395736	PHAGE_Entero_ST104_NC_005841-gi\|46358665\|ref\|YP_006373.1\|\|7.53e-66	-	MKKFKGTPGPWSGKDVRICRQDRAGLQLGFIMTHDENRVAECEANAHLIAAAPDLLEALQLAEKAMAEGRNVTYPEWYVVINKARAAISKALGEE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_000762342.1	1093154	1093615	-	154	-1	5.323	AcrVA5-1-WP_053592799.1\|HTH_AsnC-type\|30.8\|0.0063	0.119333973	935	-4.2880116	Not found in Prophage	Not found in Prophage	-	-	MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALEEAGIIKGNVSLIDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYVTGDFDFLLVLNVRDMAEYEALTRELFFSSGNIKSFKTIVVMQNAKQEMRVLIE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_000301921.1	1093612	1093845	-	78	4.5	10.2346	Acr	0.140825505	1861	-4.993808	Not found in Prophage	Not found in Prophage	-	-	MAVVVVILTLINVLIKESHNIYYVLFFIPLIMIVLCLLLLNGAKMPIVVQFSPFFNGLDAAKLRTVIVITLKRLFAI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_001555460.1	1106024	1106251	+	76	0	6.4404	WP_002706295.1\|HTH_Tnp_4\|AcrIIA15\|47.4\|0.0035	0.149824986	753	-4.065336	148	-4.065336	PHAGE_Salmon_SPN3UB_NC_019545-gi\|423262425\|ref\|YP_007011018.1\|\|1.84e-22	-	MNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_000426364.1	1106286	1106606	+	107	-2.5	4.8723	AcrIIA7-1-WP_072645192.1\|HTH_28\|41.7\|0.00055	0.512960886	2153	-5.1415834	346	-5.1415834	PHAGE_Phage_Gifsy_2_NC_010393-gi\|169257278\|ref\|YP_001700654.1\|\|4.03e-74	-	MENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_000509731.1	2106485	2107039	-	185	-6	4.9257	Acr	0.144415709	490	-3.6390018	98	-3.6390018	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100118\|ref\|YP_009324829.1\|\|7.33e-137	-	MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_001191666.1	2107068	2107292	-	75	2	8.0243	WP_031577006.1\|HTH_3-1-AcrIIA1\|32.2\|7.6e-05	0.129939096	255	-3.0232959	54	-3.0232959	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100117\|ref\|YP_009324828.1\|\|1.99e-50	-	MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_071530432.1	2107231	2107416	-	62	5	8.8872	Acr	0.241799806	473	-3.6010184	95	-3.6010184	-	-	MSDTVSYIHAFITLIFCALCKSTCASLLHEITCDIRKRRRFYAITIEKIAEIAWLYVTARR	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 5	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039561.1	WP_000826514.1	2562946	2563338	+	131	5	9.5709	WP_092544900.1\|HTH_XRE\|AcrIIA1\|56.0\|0.0041	0.241013081	521	-3.7127895	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_EW_NC_007056-gi\|66395860\|ref\|YP_240188.1\|\|0.008	-	MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAEYANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINEAD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

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1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004919145.1	NZ_CP039561	NZ_CP039561_1[3084220;3084676] (evidence-level=4), NZ_CP039561_2[3084750;3086061] (evidence-level=4), NZ_CP039561_3[3102192;3103685] (evidence-level=4),	3	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIE[3086158;3094616],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries