Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004919405.1 (Total 8 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_000301921.1	1090041	1090274	-	78	4.5	10.2346	Acr	0.140825505	1740	-4.993808	Not found in Prophage	Not found in Prophage	-	-	MAVVVVILTLINVLIKESHNIYYVLFFIPLIMIVLCLLLLNGAKMPIVVQFSPFFNGLDAAKLRTVIVITLKRLFAI	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 1	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_000762342.1	1089583	1090044	-	154	-1	5.323	AcrVA5-1-WP_053592799.1\|HTH_AsnC-type\|30.8\|0.0055	0.119333973	841	-4.2880116	Not found in Prophage	Not found in Prophage	-	-	MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALEEAGIIKGNVSLIDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYVTGDFDFLLVLNVRDMAEYEALTRELFFSSGNIKSFKTIVVMQNAKQEMRVLIE	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_001668146.1	1100771	1101070	-	100	2.5	7.8716	Acr	0.622452303	251	-3.0830424	51	-3.0830424	PHAGE_Phage_Gifsy_1_NC_010392-gi\|169257261\|ref\|YP_001700638.1\|\|5.42e-65	-	MKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_000917564.1	1101092	1101250	-	53	1.5	7.6322	Acr	0.19983272	11	-0.7528161	3	-0.7528161	PHAGE_Phage_Gifsy_2_NC_010393-gi\|169257274\|ref\|YP_001700650.1\|\|1.04e-32	-	MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_014344008.1	1101243	1101503	-	87	12	11.9723	Acr	0.234710245	2698	-5.418662	394	-5.418662	PHAGE_Phage_Gifsy_2_NC_010393-gi\|169257275\|ref\|YP_001700651.1\|\|5.33e-21	-	MLQNRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_001038966.1	1101553	1101963	-	137	1.5	7.3218	SRS415862\|NODE_1359_length_916_cov_1.476190_2\|HTH_26\|AcrIIA1\|33.3\|0.0004	0.101572595	291	-3.2224004	56	-3.2224004	PHAGE_Phage_Gifsy_1_NC_010392-gi\|169257258\|ref\|YP_001700635.1\|\|7.02e-98	-	MNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_000509731.1	2112217	2112771	-	185	-6	4.9257	Acr	0.144415709	440	-3.6390018	87	-3.6390018	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100118\|ref\|YP_009324829.1\|\|7.33e-137	-	MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_001191666.1	2112800	2113024	-	75	2	8.0243	WP_031577006.1\|HTH_3-1-AcrIIA1\|32.2\|6.7e-05	0.129939096	239	-3.0232959	49	-3.0232959	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100117\|ref\|YP_009324828.1\|\|1.99e-50	-	MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_071529734.1	2112963	2113148	-	62	4.5	8.8633	Acr	0.262800118	432	-3.6136012	85	-3.6136012	-	-	MSDTVSYIHAFITLIFCALCKSTCASLLYEITCDIRKRRRFYAITIEKIAEIAWLYVTARR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Low Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039595.1	WP_000826514.1	2568309	2568701	+	131	5	9.5709	WP_092544900.1\|HTH_XRE\|AcrIIA1\|56.0\|0.0036	0.241013081	464	-3.7127895	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_EW_NC_007056-gi\|66395860\|ref\|YP_240188.1\|\|0.008	-	MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAEYANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINEAD	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

Showing 1 to 10 of 20 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004919405.1	NZ_CP039595	NZ_CP039595_1[2892700;2892809] (evidence-level=1), NZ_CP039595_2[3083735;3084313] (evidence-level=4), NZ_CP039595_3[3084387;3085210] (evidence-level=4), NZ_CP039595_4[3101342;3102957] (evidence-level=4),	4	Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIE[3085307;3093766],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries