Results - Acr-Aca DB

Anti-CRISPR Results - GCF_004919465.1 (Total 10 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_001529719.1	370404	370835	+	144	8.5	9.9208	Acr	0.255082004	221	-2.9822693	41	-2.9822693	-	-	MEKKNRPLQAANSDIRVSDVTPLTKSPQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_000035054.1	370201	370404	+	68	2	8.9869	AcrIIA13-0-WP_006662529.1\|HTH_17\|38.3\|2.4e-08	0.149854552	23	-1.2756888	5	-1.2756888	PHAGE_Burkho_KL3_NC_015266-gi\|327198097\|ref\|YP_004306464.1\|\|1.79e-11	-	MANYNSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCILESRDEVA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 10	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_001165471.1	4626579	4626911	+	111	2	7.7491	WP_057265726.1\|HTH_38\|AcrIE7\|32.0\|2.6e-08	0.13938934	1123	-4.562122	Not found in Prophage	Not found in Prophage	PHAGE_Gordon_Obliviate_NC_031237-gi\|100039\|ref\|YP_009301782.1\|\|1.93e-05	-	MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLPVVCSLLNCVHAGTSPCEELKAKVREQLAQIDRQFDALSESRNLLNKFLND	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 10	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_071527099.1	4627020	4627079	+	20	-1	4.4258	Acr	0.279824584	72	-2.110757	Not found in Prophage	Not found in Prophage	-	-	MIDEALGVAPEKIWPSRYS	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_000762342.1	1069554	1070015	-	154	-1	5.323	AcrVA5-1-WP_053592799.1\|HTH_AsnC-type\|30.8\|0.0057	0.119333973	863	-4.2880116	Not found in Prophage	Not found in Prophage	-	-	MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALEEAGIIKGNVSLIDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYVTGDFDFLLVLNVRDMAEYEALTRELFFSSGNIKSFKTIVVMQNAKQEMRVLIE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_000301921.1	1070012	1070245	-	78	4.5	10.2346	Acr	0.140825505	1754	-4.993808	Not found in Prophage	Not found in Prophage	-	-	MAVVVVILTLINVLIKESHNIYYVLFFIPLIMIVLCLLLLNGAKMPIVVQFSPFFNGLDAAKLRTVIVITLKRLFAI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_001555460.1	1082424	1082651	+	76	0	6.4404	WP_002706295.1\|HTH_Tnp_4\|AcrIIA15\|47.4\|0.0032	0.149824986	689	-4.065336	124	-4.065336	PHAGE_Salmon_SPN3UB_NC_019545-gi\|423262425\|ref\|YP_007011018.1\|\|1.84e-22	-	MNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_000426364.1	1082686	1083006	+	107	-2.5	4.8723	AcrIIA7-1-WP_072645192.1\|HTH_28\|41.7\|0.0005	0.512960886	2030	-5.1415834	308	-5.1415834	PHAGE_Phage_Gifsy_2_NC_010393-gi\|169257278\|ref\|YP_001700654.1\|\|4.03e-74	-	MENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_000509731.1	2083234	2083788	-	185	-6	4.9257	Acr	0.144415709	446	-3.6390018	82	-3.6390018	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100118\|ref\|YP_009324829.1\|\|7.33e-137	-	MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039607.1	WP_001191666.1	2083817	2084041	-	75	2	8.0243	WP_031577006.1\|HTH_3-1-AcrIIA1\|32.2\|6.9e-05	0.129939096	229	-3.0232959	42	-3.0232959	PHAGE_Salmon_118970_sal3_NC_031940-gi\|100117\|ref\|YP_009324828.1\|\|1.99e-50	-	MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

Showing 1 to 10 of 22 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_004919465.1	NZ_CP039607	NZ_CP039607_1[3066272;3066850] (evidence-level=4), NZ_CP039607_2[3066924;3068235] (evidence-level=4), NZ_CP039607_3[3084366;3085859] (evidence-level=4),	3	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIE[3068332;3076790],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries