Results - Acr-Aca DB

Anti-CRISPR Results - GCF_005144985.1 (Total 10 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_000424138.1	377888	378178	+	97	3.5	10.3815	AcrIIA7-1-WP_072645192.1\|HTH_28\|34.7\|1.2e-07	0.380316831	93	-2.3328207	19	-2.3328207	PHAGE_Salmon_103203_sal5_NC_031946-gi\|100045\|ref\|YP_009325314.1\|\|1.53e-66	-	MELTNHSKKIREVETELRARLVSMGQTNFAKMAGWSDSKVSRLNIQDMAVTFVLLEKVWETSLIREVARQAVEAVMPRNKKRPAATERSDQIQMDF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 1	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_001059982.1	377545	377754	+	70	1.5	7.7152	NZ_LMVP01000224.1_21\|HTH_3\|AcrIIA1\|36.1\|8.2e-06	0.14710126	114	-2.476401	27	-2.476401	PHAGE_Salmon_g341c_NC_013059-gi\|255252725\|ref\|YP_003090260.1\|\|2.82e-47	-	MNNIRNFRERFGLTQEDLAKVLGCTRGAVCHYETGRRGMDINLCRAFINAFKEYGYELTIDDLFPPKAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 10	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_001165471.1	4603523	4603855	+	111	2	7.7491	WP_057265726.1\|HTH_38\|AcrIE7\|32.0\|2.6e-08	0.13938934	1108	-4.562122	Not found in Prophage	Not found in Prophage	PHAGE_Gordon_Obliviate_NC_031237-gi\|100039\|ref\|YP_009301782.1\|\|1.93e-05	-	MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLPVVCSLLNCVHAGTSPCEELKAKVREQLAQIDRQFDALSESRNLLNKFLND	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 10	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_071527099.1	4603964	4604023	+	20	-1	4.4258	Acr	0.279824584	73	-2.110757	Not found in Prophage	Not found in Prophage	-	-	MIDEALGVAPEKIWPSRYS	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_000035054.1	410308	410511	+	68	2	8.9869	AcrIIA13-0-WP_006662529.1\|HTH_17\|38.3\|2.3e-08	0.149854552	20	-1.2756888	3	-1.2756888	PHAGE_Burkho_KL3_NC_015266-gi\|327198097\|ref\|YP_004306464.1\|\|1.79e-11	-	MANYNSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCILESRDEVA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 2	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_001529719.1	410511	410942	+	144	8.5	9.9208	Acr	0.255082004	223	-2.9822693	Not found in Prophage	Not found in Prophage	-	-	MEKKNRPLQAANSDIRVSDVTPLTKSPQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_000762342.1	1108231	1108692	-	154	-1	5.323	AcrVA5-1-WP_053592799.1\|HTH_AsnC-type\|30.8\|0.0056	0.119333973	850	-4.2880116	Not found in Prophage	Not found in Prophage	-	-	MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALEEAGIIKGNVSLIDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYVTGDFDFLLVLNVRDMAEYEALTRELFFSSGNIKSFKTIVVMQNAKQEMRVLIE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 3	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_000301921.1	1108689	1108922	-	78	4.5	10.2346	Acr	0.140825505	1725	-4.993808	Not found in Prophage	Not found in Prophage	-	-	MAVVVVILTLINVLIKESHNIYYVLFFIPLIMIVLCLLLLNGAKMPIVVQFSPFFNGLDAAKLRTVIVITLKRLFAI	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_001555460.1	1121101	1121328	+	76	0	6.4404	WP_002706295.1\|HTH_Tnp_4\|AcrIIA15\|47.4\|0.0031	0.149824986	673	-4.065336	117	-4.065336	PHAGE_Salmon_SPN3UB_NC_019545-gi\|423262425\|ref\|YP_007011018.1\|\|1.84e-22	-	MNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Acr-Aca 4	Medium Confidence	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-	NZ_CP039719.1	WP_000426364.1	1121363	1121683	+	107	-2.5	4.8723	AcrIIA7-1-WP_072645192.1\|HTH_28\|41.7\|0.00048	0.512960886	1994	-5.1415834	294	-5.1415834	PHAGE_Phage_Gifsy_2_NC_010393-gi\|169257278\|ref\|YP_001700654.1\|\|4.03e-74	-	MENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

Showing 1 to 10 of 22 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_005144985.1	NZ_CP039719	NZ_CP039719_1[3116770;3117348] (evidence-level=4), NZ_CP039719_2[3117422;3118733] (evidence-level=4), NZ_CP039719_3[3134864;3136357] (evidence-level=4),	3	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIE[3118830;3127288],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries