Results - Acr-Aca DB

Anti-CRISPR Results - GCF_006364795.1 (Total 10 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_014003957.1	1270096	1270656	+	187	5	9.9854	AcrIIA14-0-WP_115347684.1\|HTH_7-1-AcrIIA14\|39.2\|8.9e-31	0.061013991	311	-3.7189412	Not found in Prophage	Not found in Prophage	PHAGE_Salmon_SJ46_NC_031129-gi\|100061\|ref\|YP_009293518.1\|\|1.19e-84	-	MQGHRIGYVRVSSFDQNPERQLEETEVSKVFTDKASGKDTQRPQLEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATAGEPKAQLAREFNISRETLYQYLRTDD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_016851620.1	1269629	1270093	+	155	-6	4.6983	Acr	0.593139891	1700	-5.1096544	Not found in Prophage	Not found in Prophage	-	-	MHCHILGRPAVDQDAPSFVGVDALQALYLRDGVIFFEKGIATLPDGTQVELGALTHEVLEVLRETYSALDAASAVITDYATTFNTPEELEKSENEILRKIAGYGNMYPMQSAIARLALLLNLDPDKNDVGIGGKVLWERIRRWRWPERHFSAEQ	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003084864.1	6271784	6272236	+	151	-0.5	6.2429	WP_117418946.1\|HTH_24-0-AcrIIC5\|37.9\|6.8e-21	0.110539826	1983	-5.2219167	Not found in Prophage	Not found in Prophage	-	-	MDDLSRRLLARYQKGLPICAEPYRRMAETLGCSEAEVLERLRRLEADGALSRVGPVLRHQRAGASTLAALAVPEERLQRVAERISQYAEVNHNYQREHRYNLWFVLTAGDRAQLDRVLAEIAADTGLQPLDLPMQEAYCIDLAFPLEASR	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003111534.1	6272233	6272757	+	175	8	9.0928	WP_117418947.1\|HTH_24\|AcrIIC5\|36.0\|9.2e-16	0.142689709	2354	-5.335764	Not found in Prophage	Not found in Prophage	-	-	MNPVEPLAAPQRQHLRYLLEQGLPLASRPYRVLAERIGAGEDEVLEQVRRWDEDGLFRRFGVILHHRALGYTANAMLVLDVADAEVDAVGRALAHETIVSLCYRRPRRLPMWPYNLFCMIHGRERGEVERQIEALLERHALRQTPHRWLFSLRAYKQCGGRYTAPPADLERRHG	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_004352179.1	6272750	6273193	+	148	-11	4.3984	WP_117418946.1\|HTH_24-0-AcrIIC5\|35.5\|4.7e-22	0.117599494	594	-4.2611256	Not found in Prophage	Not found in Prophage	-	-	MDEFDRRLLNRLQHGLPLEPHPYALLADELDCREEDILRRLDDLLDDGTLTRFGPLFDIEPLGGAFTLAAMSVPEARFEEIAALLAGWPQVAHNYRREHALNMWLVVACDSPAEVAETLARLERESGLAVLDLPKEATYHVGLHFPL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003084858.1	6273168	6273683	+	172	10.5	10.066	WP_117418947.1\|HTH_24\|AcrIIC5\|35.0\|4.7e-20	0.116915664	1274	-4.8945417	Not found in Prophage	Not found in Prophage	-	-	MSACISPSDALLARRLIELTQAGLPLVADPWAWIAAQLRLSEAETLALLKRLRDAGVIRRIAAVPNHYRLGYRHNGMTVWDVADERIERLGRLVGGLSFVSHCYRRPRHLPQWRYNLFAMVHGRSEAEIEGYRQQIRLLLGEDCRADEMLVSSRILKKTGLRLAQKEERPC	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003120987.1	1329668	1329967	+	100	6.5	10.4495	Acr	0.13516169	1057	-4.756799	Not found in Prophage	Not found in Prophage	PHAGE_Brucel_BiPBO1_NC_031264-gi\|100020\|ref\|YP_009304048.1\|\|3.79e-37	-	MVEVKQTATFMAWESKLKDRRAKAVIAARIFRLANGLPGDVSPVGQGVSELRIHYGPGYRVYFQQRGTEIVILLCGGDKSSQARDIEMAKRLANEWRPQ	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003448662.1	1329964	1330254	+	97	-2.5	4.7527	ERS698769\|NODE_65_length_3937_cov_11.438691_5\|HTH_3-0-AcrIIA3\|37.7\|0.00076	0.141162582	1595	-5.062365	218	-5.062365	PHAGE_Brucel_BiPBO1_NC_031264-gi\|100019\|ref\|YP_009304047.1\|\|5.79e-21	-	MTEQIYDYDPAQALDSPEAMALFIADALDTGDTAYIAKAMGVVARAKGMTELAKETGLAREQLYKSFSERGNPTLKTMLAVMRALGVDLTARPHAQ	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003089396.1	3548259	3548417	+	53	6.5	11.8156	Acr	0.291076578	455	-4.0334015	Not found in Prophage	Not found in Prophage	-	-	MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Medium Confidence	Pseudomonas aeruginosa	NZ_CP041013.1	WP_003122724.1	3548472	3549053	+	194	0	6.4913	WP_022747448.1\|HTH_3\|AcrIIA1\|35.8\|5.7e-30	0.080735318	2614	-5.400122	Not found in Prophage	Not found in Prophage	PHAGE_Thermo_THSA_485A_NC_018264-gi\|397912660\|ref\|YP_006546324.1\|\|8.16e-07	-	MHTEPDDLIGQRVAHNLLRLRGKRNLSLDALARISGVSRAMLAQIESGRSVPSIKVLCKIAQGLKVSVAAFLDDRAFAGVAVLPAQQSKRLVSADGAFTSRALFPFDVARQVEFYELRLRGLGQEDAEAHAPGTQENLVVAQGVLEVRVNEERFLLATGDSILFYADQPHSYRNPADSEALAYLVMTYPERLD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 10 of 23 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_006364795.1	NZ_CP041013.1	1304827	1305150	-	WP_003158159.1	108	0.722359942	113	-2.8666308	21	-2.8666308	AcrIE1\|62.1	MSNQQKNFGDAQVALVAAWRKHPELRESLDGVVSEVLSQIVFQTEMLSKQAEGLARYVRRTHSDEDEVVRVLCYNIDIQINRIISICGEVNQHGIRVYGDAIDRDVD	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_006364795.1	NZ_CP041013.1	1305169	1305561	-	WP_003158160.1	131	0.88049109	4	-0.7432457	2	-0.7432457	AcrIF3\|42.5	MDENYIIARSIKEANKFIQTWEEADIEKLTDDQTRAAIGFASKINSELREWIRMHLDGEGTAHEEGYLKEQQAPWKKANTGDLFTDFGWWHRIANLMLHTAYINHAMLGGDQYHSRLMKIFRDRFSYPEE	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_006364795.1	NZ_CP041013.1	1307303	1307677	-	WP_003158163.1	125	0.850113627	15	-1.5265639	Not found in Prophage	Not found in Prophage	AcrIF12\|100.0	MAYEKTWHRDYAAESLKRAETSRWTQDANLEWTQLALECAQVVHLARQVGEELGNEKIIGIADTVLSTIEAHSQATYRRPCYKRITTAQTHLLAVTLLERFGSARRVANAVWQLTDDEIDQAKA	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 3 of 3 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_006364795.1	NZ_CP041013	NZ_CP041013_1[2284804;2285564] (evidence-level=4), NZ_CP041013_2[2294156;2295099] (evidence-level=4), NZ_CP041013_3[3742348;3743096] (evidence-level=4), NZ_CP041013_4[3751620;3752787] (evidence-level=4),	4	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=4	CAS-TypeIE[2286285;2294091], CAS-TypeIF[3743357;3751496],	2	CAS-TypeIE (n=1), CAS-TypeIF (n=1),