Results - Acr-Aca DB

Anti-CRISPR Results - GCF_007964465.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249757.1	95411	95977	+	189	2.5	7.0858	WP_095590313.1\|HTH_23-0-AcrIF6\|37.5\|1.3e-06	0.135199451	120	-2.3267798	Not found in Prophage	Not found in Prophage	PHAGE_Pseudo_PA11_NC_007808-gi\|149408171\|ref\|YP_001294605.1\|\|0.005	-	MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKHSASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEHQDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISLSNLNVLLHRARLRLQECLSRNWFREESK	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 1	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249756.1	95974	96159	+	62	9	10.1765	Acr	0.149426432	485	-3.8250227	Not found in Prophage	Not found in Prophage	-	-	MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNTKKLGKILRAYCNDKDAPF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 1	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249755.1	96189	96473	+	95	2.5	7.6418	Acr	0.128970463	350	-3.4659867	Not found in Prophage	Not found in Prophage	-	-	MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEVHICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 2	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249607.1	112587	112838	-	84	-1	5.6002	Acr	0.373114555	106	-2.2405803	Not found in Prophage	Not found in Prophage	-	-	MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATVIAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 2	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249608.1	112850	113332	-	161	-0.5	6	AcrIIA7-3-WP_057903263.1\|HTH_3\|35.1\|0.0043	0.04722432	1310	-4.9468126	Not found in Prophage	Not found in Prophage	PHAGE_Haemop_SuMu_NC_019455-gi\|418489036\|ref\|YP_007002909.1\|\|3.43e-11	-	MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAWEADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVVVIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 3	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249609.1	113516	113779	+	88	7	10.4095	WP_005567622.1\|HTH_35-3-AcrIF9\|62.3\|1.1e-19	0.146408531	278	-3.2246957	82	-3.2246957	PHAGE_Haemop_SuMu_NC_019455-gi\|418489037\|ref\|YP_007002910.1\|\|1.25e-46	-	MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSSTLKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 3	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249610.1	113795	114325	+	177	7.5	9.8361	Acr	0.101998711	2188	-5.6222377	395	-5.6222377	PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766-gi\|971741504\|ref\|YP_009196052.1\|\|2.60e-69	-	MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREIADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIVPIFSPIMPDFPLDSRD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 4	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_015484183.1	1431603	1432193	+	197	-2.5	5.1081	Acr	0.55296539	204	-2.901127	63	-2.901127	PHAGE_Mannhe_vB_MhS_535AP2_NC_028853-gi\|971749620\|ref\|YP_009203400.1\|\|2.90e-144	-	MTTQITTAQINDLLKSHDIQGYANEWQGRRIYINLSAKNNESRGDRNYQLYIDLATGELVSKLGKGLTTREFDAAVKAFENAFNAKDTAENTSPAESKETEQENKQETTKLVITKPTLKGSEKQIAWADEIINLFIAKIGDTSIPVTATQEQITQAQAMVDNFFAMTNAGKWIEKFKGLNDSSEPKQFWLSVKYGW	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 4	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006249172.1	1432263	1432781	+	173	3	8.9234	AcrVA3-0-WP_077553360.1\|DUF1870\|68.4\|1.7e-39	0.225303573	748	-4.3002214	183	-4.3002214	PHAGE_Mannhe_vB_MhS_535AP2_NC_028853-gi\|971749619\|ref\|YP_009203399.1\|\|1.39e-126	-	MTTQVTPQIMRIIGQIVAATYGDDVPTNVQTIILRYPIRGIGFISSRRELSINNGEIARLMDKIPGDLEDPKDGMPFDCQGAFWLGYYQYCKLSNDVKNYTSKELSIIGESLYGTQWQSNLARDLRLSDARRVREWVAGERKIPFGVWADLTELVKAKKANLSSILKKLTID	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Acr-Aca 5	Medium Confidence	Mannheimia haemolytica	NZ_CP017543.1	WP_006253537.1	1468357	1468617	-	87	2	8.549	WP_142130479.1\|HTH_Tnp_ISL3\|AcrIIA1\|36.7\|0.0086	0.553262354	191	-2.8368797	58	-2.8368797	PHAGE_Mannhe_vB_MhS_535AP2_NC_028853-gi\|971749644\|ref\|YP_009203424.1\|\|1.86e-57	-	MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTFADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica

Showing 1 to 10 of 16 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_007964465.1	NZ_CP017543	NZ_CP017543_1[913926;914000] (evidence-level=1), NZ_CP017543_2[918164;918242] (evidence-level=1), NZ_CP017543_3[1066710;1067813] (evidence-level=4), NZ_CP017543_4[1596144;1596218] (evidence-level=1),	4	Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIC[1059775;1066519],	1	CAS-TypeIC (n=1),

Showing 1 to 1 of 1 entries