Results - Acr-Aca DB

Anti-CRISPR Results - GCF_008195485.1 (Total 12 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_003084860.1	570924	571367	-	148	-10	4.4599	WP_117418946.1\|HTH_24-0-AcrIIC5\|34.7\|4.4e-21	0.115836796	559	-4.203302	Not found in Prophage	Not found in Prophage	-	-	MDEFDRRLLNRLQHGLPLEPHPYALLAAELDCREEDILRRLDDLLDDGTLTRFGPLFDIEPLGGAFTLAAMSVPEARFEEIAALLAGWPQVAHNYRREHALNMWLVVACDSPAEVAETLARLERESGLAVLDLPKEATYHVGLHFPL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_003084862.1	571360	571884	-	175	8	9.0928	WP_117418947.1\|HTH_24\|AcrIIC5\|36.0\|1.3e-15	0.147677686	2399	-5.335764	Not found in Prophage	Not found in Prophage	-	-	MNPVEPLAAPQRQHLRYLLEQGLPLASRPYRVLAERIGAGEDEVLEQVRRWDEDGLFRRFGVILHHRALGYTANAMLVLDVADAEVDVVGRALAHETIVSLCYRRPRRLPMWPYNLFCMIHGRERGEVERQIEALLERHALRQTPHRWLFSLRAYKQCGGRYTAPPADLERRHG	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_003084864.1	571881	572333	-	151	-0.5	6.2429	WP_117418946.1\|HTH_24-0-AcrIIC5\|37.9\|7.4e-21	0.110539826	2011	-5.2219167	Not found in Prophage	Not found in Prophage	-	-	MDDLSRRLLARYQKGLPICAEPYRRMAETLGCSEAEVLERLRRLEADGALSRVGPVLRHQRAGASTLAALAVPEERLQRVAERISQYAEVNHNYQREHRYNLWFVLTAGDRAQLDRVLAEIAADTGLQPLDLPMQEAYCIDLAFPLEASR	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_003084858.1	570434	570949	-	172	10.5	10.066	WP_117418947.1\|HTH_24\|AcrIIC5\|35.0\|5.2e-20	0.116915664	1298	-4.8945417	Not found in Prophage	Not found in Prophage	-	-	MSACISPSDALLARRLIELTQAGLPLVADPWAWIAAQLRLSEAETLALLKRLRDAGVIRRIAAVPNHYRLGYRHNGMTVWDVADERIERLGRLVGGLSFVSHCYRRPRHLPQWRYNLFAMVHGRSEAEIEGYRQQIRLLLGEDCRADEMLVSSRILKKTGLRLAQKEERPC	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	High Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_031691692.1	4937530	4937832	+	101	-15	3.6835	Acr	0.908351823	1	1.4342747	1	1.4342747	-	AcrIF6\|99.0	MKVPAFFAANILTIEQIIEAINNDGSAMTSAPEIAGYYAWDAATDALESENDLEQLTEDDFVAHLEVLEERGAKINRDAAIAVALQFQAAAVNDLHSGDE		No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 10	High Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_031691693.1	4937829	4938047	+	73	1	7.1621	WP_031691693.1\|HTH_29-0-AcrIF6\|100.0\|7.6e-40	0.26131318	1130	-4.7893033	147	-4.7893033	PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575-gi\|589286938\|ref\|YP_009007133.1\|\|5.44e-43	-	MKPDSANHNPDPRYLRGLVDRSGISQRQAAELLGLSWPGFRNYLRDESHQLYRAAPYTVQFALECLAESPSS		No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 11	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_023098867.1	6497466	6497690	-	75	0	6.2346	AcrIIA13-0-WP_006662529.1\|HTH_17\|36.2\|8.1e-07	0.147418133	647	-4.3301644	Not found in Prophage	Not found in Prophage	PHAGE_Stenot_S1_NC_011589-gi\|213163928\|ref\|YP_002321480.1\|\|2.43e-13	-	MASTTSSTQPIRRFIKRQAVEEITGLSCSEIYRRIAAGTFPAQVILGPKSVVWIESEVMDWCDARVAESRGEVA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 11	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_123822971.1	6497802	6498314	-	171	-4	4.8212	Acr	0.24116381	2323	-5.3154726	Not found in Prophage	Not found in Prophage	-	-	MNASLPLMSNHPVARSSEDLIRSRVESVGLNTIARVVGVDAPVLYGRYGNDIALIGRLLELLKLRVVGEELVVTGPVDSPVTGGEDVPLAGSSSEPGIAFPYATRELKAMHAAAMKYWADYTPDKRQPTQKEIGIEIGELLDLSLQSNNEPARKAIVLASAIKPDSISGD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 12	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_123788631.1	6535811	6536173	-	121	-6	4.7437	Acr	0.745151312	294	-3.7006865	Not found in Prophage	Not found in Prophage	-	-	MDEEFRCEIFKNAKQLHGVFYLGRYGYVVEEVLEMERFLHALASEKRERNVLSLLHHDPNASFYDNETVEGLSADGPDGVCLNRVAADHLFQFHLFGAAGQMVPFADVPLKSCGDFAGTP	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 12	Medium Confidence	Pseudomonas aeruginosa	NZ_CP043328.1	WP_031637493.1	6536209	6536679	-	157	-3.5	5.0988	ERS698714\|NODE_1166_length_747_cov_2.005780_1\|HTH_XRE-0-AcrIIA1\|31.7\|1.3e-05	0.064321582	432	-4.006497	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_JCL1032_NC_019456-gi\|418489143\|ref\|YP_007002999.1\|\|1.74e-05	-	MYPLGHMLGTHLEMSTDKNAQTETSVRLRAALEAKGLSIKEAAEACEIPYRSFQNYTLGLREPNAEALGTISSRLGISVDWLLTGDGQMLRGASVKVAHDGAENPREQALLALWRELDEGEQREIQLAAEEKKRLKILEQRLAELEAVVADAKRLA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 10 of 31 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

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GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_008195485.1	NZ_CP043328.1	2155060	2155527	+	WP_034085410.1	156	0.064032677	4481	-5.7074194	432	-5.7074194	---	MANRIELELVDREVQERLAALYAAVTDTLPLMRGIAAELLAETEFAFMDEGPGWPQLSPATVAARAAKGRGAHPILQVTNALARSITTRADRDQAQIGSNLSYAPIQQLGGQAGRGRKVTIPARPYLPVLRNGQLKPSARDAVLDVLLAALSQGR	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	2155641	2155895	+	WP_016068301.1	85	0.886457564	17	-1.4996132	3	-1.4996132	AcrIE2\|100.0	MNTYLIDPRKNNDNSGERFTVDAVDITAAAKSAAQQILGEEFEGLVYRETGESNGSGMFQAYHHLHGTNRTETTVGYPFHVMEL	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	2155952	2156371	+	WP_034085409.1	140	0.862986057	49	-2.207651	9	-2.207651	AcrIF3\|90.6	MSTISDRIVARSVIEAARFIQSWEDADLDNLTESQVLAASGFAARLHEGLQATVLQRLVDQSNHEEYREFIAWEEALVNADGRVASNPFADWGWWYRIANVMLAAASQNVGAAWGSHVHGRLMTIFQDRFQQHYEDEEC	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	2156365	2156589	+	WP_034085408.1	75	0.227538256	3003	-5.468386	336	-5.468386	---	MLTPDASSHNPDPRYLRGLLKKAGISQRRAAELLGLGDRVMRYYLSEDVKEGYRPAPYTVQFALECLASDPPSA	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	2021857	2022129	-	WP_015972868.1	91	0.929660495	2	0.3760598	2	0.3760598	AcrIF2\|100.0	MIAQQHKDTVAACEAAEAIAIAKDQVWDGEGYTKYTFDDNSVLIQSGTTQYAMDADDADSIKGYADWLDDEARSAEASEIERLLESVEEE	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	2022260	2022727	-	WP_034085412.1	156	0.069041831	4238	-5.674819	415	-5.674819	---	MANRIELELVDRKVQERLAALYAAVTDTLPLMRGIAAELLAETEFAFMDEGPGWPQLSPVTVAARAAKGRGAHPILQVTNALARSITTRADRDQAQIGSNLSYAAIQQLGGQAGRGRKVTIPARPYLPVLRNGQLKPSARDAVLDVLLTALSQGR	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	4937530	4937832	+	WP_031691692.1	101	0.908351823	1	1.4342747	1	1.4342747	AcrIF6\|99.0	MKVPAFFAANILTIEQIIEAINNDGSAMTSAPEIAGYYAWDAATDALESENDLEQLTEDDFVAHLEVLEERGAKINRDAAIAVALQFQAAAVNDLHSGDE	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008195485.1	NZ_CP043328.1	4937829	4938047	+	WP_031691693.1	73	0.26131318	1130	-4.7893033	147	-4.7893033	---	MKPDSANHNPDPRYLRGLVDRSGISQRQAAELLGLSWPGFRNYLRDESHQLYRAAPYTVQFALECLAESPSS	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 8 of 8 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_008195485.1	NZ_CP043328	NZ_CP043328_1[60197;60344] (evidence-level=1), NZ_CP043328_2[342192;342305] (evidence-level=1), NZ_CP043328_3[5683715;5685070] (evidence-level=4),	3	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIC[5685252;5692862],	1	CAS-TypeIC (n=1),