PUL ID |
PUL0234 |
PubMed |
24522261, ISME J. 2014 Jul;8(7):1492-502. doi: 10.1038/ismej.2014.4. Epub 2014 Feb 13. |
Characterization method |
proteome fractionation,mass spectrometry,target decoy database analysis |
Genomic accession number |
CU207366.1 |
Nucelotide position range |
3621545-3636631 |
Substrate |
laminarin |
Loci |
GFO_3462-GFO_3468 |
Species |
Gramella forsetii/411153 |
Degradation or Biosynthesis |
degradation |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
- | GFO_3462 | CAL68401.1 | 0 - 2799 (+) | CU207366.1:3621545-3624344 | - |
- | GFO_3463 | CAL68402.1 | 3039 - 6072 (+) | CU207366.1:3624584-3627617 | - |
- | GFO_3464 | CAL68403.1 | 6082 - 7564 (+) | CU207366.1:3627627-3629109 | - |
- | GFO_3465 | CAL68404.1 | 7582 - 10297 (+) | CU207366.1:3629127-3631842 | - |
- | GFO_3466 | CAL68405.1 | 10300 - 11965 (+) | CU207366.1:3631845-3633510 | 3.2.1.- |
bglX | GFO_3467 | CAL68406.1 | 12025 - 14299 (+) | CU207366.1:3633570-3635844 | 3.2.1.21 |
- | GFO_3468 | CAL68407.1 | 14298 - 15087 (+) | CU207366.1:3635843-3636632 | 3.2.1.- |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 1 - 2799 (+) | TF: DBD-Pfam|GerE | No |
- | 3040 - 6072 (+) | TC: gnl|TC-DB|G0LBU8|1.B.14.6.11 | Yes |
- | 6083 - 7564 (+) | TC: gnl|TC-DB|C6Y217|8.A.46.1.3 | Yes |
- | 7583 - 10297 (+) | other | Yes |
- | 10301 - 11965 (+) | CAZyme: GH16 | Yes |
bglX | 12026 - 14299 (+) | CAZyme: GH3 | Yes |
- | 14299 - 15087 (+) | CAZyme: GH16 | Yes |
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