PUL ID |
PUL0262 |
PubMed |
23976882, PLoS Biol. 2013;11(8):e1001637. doi: 10.1371/journal.pbio.1001637. Epub 2013 Aug 20. |
Characterization method |
RNA-Seq |
Genomic accession number |
CP012801.1 |
Nucelotide position range |
5567610-5593852 |
Substrate |
xylan,arabinoxylan |
Loci |
BcellWH2_04296-BcellWH2_04307 |
Species |
Bacteroides cellulosilyticus/246787 |
Degradation or Biosynthesis |
degradation |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 1 - 3135 (+) | TC: gnl|TC-DB|Q45780|1.B.14.6.1 | Yes |
- | 3147 - 5015 (+) | other | Yes |
- | 5046 - 7874 (+) | other | Yes |
- | 7919 - 9715 (+) | other | Yes |
- | 9769 - 10791 (+) | other | Yes |
- | 10824 - 12989 (+) | CAZyme: GH10|CBM4 | Yes |
xylI_1 | 13241 - 14356 (+) | CAZyme: GH10 | Yes |
- | 14511 - 16478 (+) | CAZyme: GH5_21|GH5 | Yes |
xynZ_1 | 16593 - 17474 (+) | CAZyme: CE1|CE0 | Yes |
axe1-6A_3 | 17508 - 20732 (+) | CAZyme: CE6|GH95 | Yes |
- | 20774 - 22027 (+) | CAZyme: GH8 | Yes |
tmoS_23 | 22131 - 26243 (-) | TF: DBD-Pfam|HTH_AraC,DBD-Pfam|HTH_AraC,DBD-SUPERFAMILY|0036286,DBD-SUPERFAMILY|0035607,DBD-SUPERFAMILY|0035607 | No |
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