Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0007 sequence homology analysis galactan Leuconostoc gelidum 27274361
Complete genome sequence of Leuconostoc gelidum subsp. gasicomitatum KG16-1, isolated from vacuum-packaged vegetable sausages. Stand Genomic Sci. 2016 Jun 7;11:40. doi: 10.1186/s40793-016-0164-8. eCollection 2016.
2016 degradation 8 2 GH53, GH42
PUL0014 sequence homology analysis, growth assay pectin Geobacillus thermodenitrificans 28900693
Complete Genome Sequence of Geobacillus thermodenitrificans T12, A Potential Host for Biotechnological Applications. Curr Microbiol. 2018 Jan;75(1):49-56. doi: 10.1007/s00284-017-1349-0. Epub 2017 Sep 12.
2018 Jan degradation 9 2 PL1_6, PL1, GH105
PUL0025 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 32093600
Elucidation of the K32 Capsular Polysaccharide Structure and Characterization of the KL32 Gene Cluster of Acinetobacter baumannii LUH5549. Biochemistry (Mosc). 2020 Feb;85(2):241-247. doi: 10.1134/S000629792002011X.
2020 Feb biosynthesis 18 4 GT2, GT4, GT0, GT2
PUL0043 Smith degradation, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 29886169
Structure and gene cluster of the K125 capsular polysaccharide from Acinetobacter baumannii MAR13-1452. Int J Biol Macromol. 2018 Oct 1;117:1195-1199. doi: 10.1016/j.ijbiomac.2018.06.029. Epub 2018 Jun 7.
2018 Oct 1 biosynthesis 23 3 GT4
PUL0046 NMR, sequence homology analysis O-antigen Escherichia coli 29738687
O-Antigens of Escherichia coli Strains O81 and HS3-104 Are Structurally and Genetically Related, Except O-Antigen Glucosylation in E. coli HS3-104. Biochemistry (Mosc). 2018 May;83(5):534-541. doi: 10.1134/S0006297918050061.
2018 May biosynthesis 16 5 GT2
PUL0047 sugar utilization assay, NMR, sequence homology analysis O-antigen Escherichia albertii 31622726
Escherichia albertii EA046 (O9) harbors two polysaccharide gene clusters for synthesis of the O-antigen by the Wzx/Wzy-dependent pathway and a mannan shared by Escherichia coli O8 by the Wzm/Wzt-dependent pathway. Int J Biol Macromol. 2020 Jan 1;142:609-614. doi: 10.1016/j.ijbiomac.2019.09.135. Epub 2019 Oct 14.
2020 Jan 1 biosynthesis 25 8 GT4, GT4
PUL0051 sequence homology analysis alginate Cellulophaga lytica 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 6 2 PL6_1, PL6, PL17_2, PL17
PUL0052 sequence homology analysis alginate Maricaulis maris 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 10 2 PL6, PL6_1, PL17, PL17_2
PUL0053 sequence homology analysis alginate Stenotrophomonas maltophilia 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 8 2 PL6_1, PL6, PL17, PL17_2
PUL0054 sequence homology analysis alginate Alteromonas macleodii 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 9 2 PL6, PL6_1, PL17_2, PL17
PUL0055 sequence homology analysis alginate Bacteroides sp. 1_1_30 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 7 2 PL17, PL17_2, PL6, PL6_1
PUL0056 sequence homology analysis alginate Bacteroides eggerthii 29795267
Ancient acquisition of "alginate utilization loci" by human gut microbiota. Sci Rep. 2018 May 23;8(1):8075. doi: 10.1038/s41598-018-26104-1.
2018 May 23 degradation 5 3 PL6_1, PL6, PL17, PL17_2
PUL0057 NMR, sequence homology analysis O-antigen Escherichia coli 29787897
Structural and genetic relatedness of the O-antigens of Escherichia coli O50 and O2. Carbohydr Res. 2018 Jul 15;464:8-11. doi: 10.1016/j.carres.2018.05.001. Epub 2018 May 7.
2018 Jul 15 biosynthesis 13 5 GT4, GT4
PUL0059 NMR, sequence homology analysis O-antigen Escherichia coli 29787897
Structural and genetic relatedness of the O-antigens of Escherichia coli O50 and O2. Carbohydr Res. 2018 Jul 15;464:8-11. doi: 10.1016/j.carres.2018.05.001. Epub 2018 May 7.
2018 Jul 15 biosynthesis 13 3 GT2
PUL0060 NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 31421354
Acinetobacter baumannii K116 capsular polysaccharide structure is a hybrid of the K14 and revised K37 structures. Carbohydr Res. 2019 Oct 1;484:107774. doi: 10.1016/j.carres.2019.107774. Epub 2019 Aug 8.
2019 Oct 1 biosynthesis 24 4 GT2, GT2, GT4, GT2
PUL0061 NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 31421354
Acinetobacter baumannii K116 capsular polysaccharide structure is a hybrid of the K14 and revised K37 structures. Carbohydr Res. 2019 Oct 1;484:107774. doi: 10.1016/j.carres.2019.107774. Epub 2019 Aug 8.
2019 Oct 1 biosynthesis 35 4 GT2, GT2, GT4, GT2, GT4, CE4
PUL0062 NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 31421354
Acinetobacter baumannii K116 capsular polysaccharide structure is a hybrid of the K14 and revised K37 structures. Carbohydr Res. 2019 Oct 1;484:107774. doi: 10.1016/j.carres.2019.107774. Epub 2019 Aug 8.
2019 Oct 1 biosynthesis 19 4 GT2, GT2, GT4, GT2
PUL0069 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 30664967
Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster. Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.
2019 May 1 biosynthesis 22 2 GT0, GT2
PUL0070 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 30664967
Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster. Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.
2019 May 1 biosynthesis 36 3 GT52, GT0, GT14, GT2, GT25, GT4, CE4
PUL0071 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 30664967
Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster. Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.
2019 May 1 biosynthesis 38 4 GT0, GT14, GT2, GT25, GT4, CE4
PUL0072 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 30664967
Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster. Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.
2019 May 1 biosynthesis 22 2 GT2, GT0
PUL0073 sugar utilization assay, NMR, sequence homology analysis capsule polysaccharide Acinetobacter baumannii 30664967
Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster. Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.
2019 May 1 biosynthesis 22 2 GT2
PUL0074 sequence homology analysis capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 36 5 GT2, GT4
PUL0075 sequence homology analysis capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 25 5 GT2, GT4, GT2
PUL0076 sequence homology analysis capsule polysaccharide, outer core capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 7 7 GT4, CE4
PUL0077 sequence homology analysis capsule polysaccharide, outer core capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 11 7 GT4, CE4
PUL0079 sequence homology analysis capsule polysaccharide, outer core capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 16 6 CE4, GT4, GT2
PUL0080 sequence homology analysis capsule polysaccharide, outer core capsule polysaccharide Acinetobacter baumannii 31396168
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118. Front Microbiol. 2019 Jul 23;10:1599. doi: 10.3389/fmicb.2019.01599. eCollection 2019.
2019 biosynthesis 12 6 CE4, GT4, GT2
PUL0090 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia coli 31220629
Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii capital ES, Cyrillic-134. Carbohydr Res. 2019 Jul 15;481:9-15. doi: 10.1016/j.carres.2019.06.001. Epub 2019 Jun 6.
2019 Jul 15 biosynthesis 12 4 GT4, GT4, GT4
PUL0091 sequence homology analysis O-glycan, N-glycan Bacteroides vulgatus 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 8 6 CE9, GH2, GH92, GH20, GH20, GH2
PUL0092 sequence homology analysis O-glycan, N-glycan Bacteroides vulgatus 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 10 4 GH20, GH2, GH20, GH33
PUL0097 sequence homology analysis O-glycan, N-glycan Bacteroides massiliensis 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 15 10 GH33, GH20, GH2, GH20, GH20, GH92, GH2, CE9
PUL0098 sequence homology analysis O-glycan, N-glycan Bacteroides plebeius 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 12 3 GH33
PUL0101 sequence homology analysis O-glycan, N-glycan Bacteroides plebeius 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 19 5 CBM67, GH78, GH3, GH115, GH97
PUL0108 sequence homology analysis O-glycan, N-glycan Bacteroides uniformis 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 27 3 GH2, GH3
PUL0113 sequence homology analysis O-glycan, N-glycan Faecalibacterium prausnitzii 31275257
Investigating Host Microbiota Relationships Through Functional Metagenomics. Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019.
2019 degradation 23 1 GH1
PUL0126 growth assay, sequence homology analysis alginate, ulvan Alteromonas sp. 76-1 30936857
Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems. Front Microbiol. 2019 Mar 18;10:504. doi: 10.3389/fmicb.2019.00504. eCollection 2019.
2019 degradation 8 2 PL7, PL7_5, PL6, PL6_1
PUL0127 growth assay, sequence homology analysis alginate, ulvan Alteromonas sp. 76-1 30936857
Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems. Front Microbiol. 2019 Mar 18;10:504. doi: 10.3389/fmicb.2019.00504. eCollection 2019.
2019 degradation 12 3 PL7, PL7_5, CBM32, PL6_3, PL6, PL7, PL7_5, PL6, PL6_1
PUL0131 sequence homology analysis O-antigen Acidiphilium rubrum 30385338
Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78. Int J Biol Macromol. 2019 Feb 1;122:555-561. doi: 10.1016/j.ijbiomac.2018.10.189. Epub 2018 Oct 29.
2019 Feb 1 biosynthesis 12 3 GT4, GT4, GT4
PUL0133 sequence homology analysis exopolysaccharide Lactobacillus acidophilus 15671160
Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc Natl Acad Sci U S A. 2005 Mar 15;102(11):3906-12. doi: 10.1073/pnas.0409188102. Epub 2005 Jan 25.
2005 Mar 15 biosynthesis 14 3 GT2, GT2
PUL0134 sequence homology analysis pectin Gramella flava 30341080
Biochemical Reconstruction of a Metabolic Pathway from a Marine Bacterium Reveals Its Mechanism of Pectin Depolymerization. Appl Environ Microbiol. 2018 Dec 13;85(1). pii: AEM.02114-18. doi: 10.1128/AEM.02114-18. Print 2019 Jan 1.
2019 Jan 1 degradation 29 10 CE8, PL9_1, GH28, GH105, GH43_10, GH28, PL9_1, CE12, CE8, CE10, CE12, PL10_1
PUL0136 sequence homology analysis pectin Pseudoalteromonas haloplanktis 30341080
Biochemical Reconstruction of a Metabolic Pathway from a Marine Bacterium Reveals Its Mechanism of Pectin Depolymerization. Appl Environ Microbiol. 2018 Dec 13;85(1). pii: AEM.02114-18. doi: 10.1128/AEM.02114-18. Print 2019 Jan 1.
2019 Jan 1 degradation 26 6 PL1, PL1_5, CE8, PL1, PL1_2, GH105, GH105, GH28
PUL0137 sequence homology analysis lactose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 3 1 GH2
PUL0138 sequence homology analysis raffinose, melibiose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 7 2 GH36, GH36
PUL0139 sequence homology analysis arabinose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 12 1 GH51
PUL0140 sequence homology analysis xylose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 11 5 GH43, GH43_12, GH43, GH43_11, GH43_10
PUL0141 sequence homology analysis sucrose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 4 1 GH13_18, GH13
PUL0142 sequence homology analysis maltose Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 5 1 GH13_30
PUL0143 sequence homology analysis exopolysaccharide Bifidobacterium animalis subsp. animalis 30306201
Staying alive: growth and survival of Bifidobacterium animalis subsp. animalis under in vitro and in vivo conditions. Appl Microbiol Biotechnol. 2018 Dec;102(24):10645-10663. doi: 10.1007/s00253-018-9413-7. Epub 2018 Oct 10.
2018 Dec degradation 12 3 GT2, GT32
PUL0146 sequence homology analysis carrageenan Pseudoalteromonas atlantica 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 23 1 GH16
PUL0147 sequence homology analysis carrageenan Pseudoalteromonas carrageenovora 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 30 5 GH16, GH16, GH150
PUL0148 sequence homology analysis carrageenan Zobellia galactanivorans 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 15 4 GH127, GH127, GH127, GH129
PUL0149 sequence homology analysis carrageenan Zobellia galactanivorans 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 10 2 GH110, GH110
PUL0150 sequence homology analysis alginate Pseudoalteromonas carrageenovora 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 14 3 PL6, PL6_1, PL17, PL17_2, PL6_3
PUL0151 sequence homology analysis, Northern Blot, RT-qPCR, electrophoretic mobility shift assay, clone and expression, gene deletion mutant and growth assay alginate Zobellia galactanivorans 30524390, 32585009
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Regulation of alginate catabolism involves a GntR family repressor in the marine flavobacterium Zobellia galactanivorans DsijT. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018. Nucleic Acids Res. 2020 Aug 20;48(14):7786-7800. doi: 10.1093/nar/gkaa533.
2018,2020 Aug 20 degradation 12 2 PL7, PL17_2, PL17
PUL0152 sequence homology analysis alginate Pseudoalteromonas atlantica 30524390
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9(T) to Adapt to Macroalgal Niches. Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.
2018 degradation 8 1 PL6, PL6_1
PUL0160 mass spectrometry, sequence homology analysis alpha-mannan Salegentibacter sp. Hel_I_6 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 33 10 GH92, GH92, GH43, GH43_34, GH125, CBM32, GH92, GH92, GH92, GH76, GH2, GH92
PUL0161 mass spectrometry, sequence homology analysis alpha-mannan Bacteroides thetaiotaomicron 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 26 6 GH97, GH67, GH76, GH92, GH76, GH125
PUL0162 mass spectrometry, sequence homology analysis alpha-mannan Bacteroides thetaiotaomicron 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 13 2 GH92, GH99
PUL0163 mass spectrometry, sequence homology analysis alpha-mannan Bacteroides thetaiotaomicron 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 21 7 GH92, GH38, CBM32, GT32, GT32, GH130, GH125, GH76, GH92, GH76
PUL0164 mass spectrometry, sequence homology analysis, differential gene expression beta-mannan Leeuwenhoekiella sp. MAR_2009_132 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 19 9 CE2, GH3, GH5_7, GH26, GH130, GH26, GH5_2, GH5, GH27, GH9, GH26
PUL0165 mass spectrometry, sequence homology analysis, differential gene expression beta-mannan Salegentibacter sp. Hel_I_6 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 17 6 GH9, GH27, GH5, GH5_2, GH26, GH130, GH26
PUL0167 mass spectrometry, sequence homology analysis beta-mannan Bacteroides ovatus 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 12 4 GH130, GH36, GH26, GH26
PUL0173 sequence homology analysis, NMR, sugar utilization assay O-antigen Escherichia coli 27177202
Structure and gene cluster of the O-antigen of Escherichia coli O156 containing a pyruvic acid acetal. Carbohydr Res. 2016 Jul 22;430:24-28. doi: 10.1016/j.carres.2016.04.025. Epub 2016 Apr 29.
2016 Jul 22 biosynthesis 20 4 GT4, GT4, GT2
PUL0239 fosmid library screen, sequence homology analysis cellulose Prevotella sp. Sc00026 24448980
Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes. J Ind Microbiol Biotechnol. 2014 Mar;41(3):601-6. doi: 10.1007/s10295-013-1395-y. Epub 2014 Jan 22.
2014 Mar degradation 18 10 GH26, GH5_4, GH5_7, GH130, GH26, CE7, GH36, GH3
PUL0240 fosmid library screen, sequence homology analysis cellulose Prevotella sp. Sc00028 24448980
Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes. J Ind Microbiol Biotechnol. 2014 Mar;41(3):601-6. doi: 10.1007/s10295-013-1395-y. Epub 2014 Jan 22.
2014 Mar degradation 11 5 GH31, GH9, GH26
PUL0241 fosmid library screen, sequence homology analysis cellulose Prevotella sp. Sc00033 24448980
Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes. J Ind Microbiol Biotechnol. 2014 Mar;41(3):601-6. doi: 10.1007/s10295-013-1395-y. Epub 2014 Jan 22.
2014 Mar degradation 7 3 GH5, GH5_4, GH36
PUL0242 fosmid library screen, sequence homology analysis cellulose Prevotella sp. Sc00044 24448980
Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes. J Ind Microbiol Biotechnol. 2014 Mar;41(3):601-6. doi: 10.1007/s10295-013-1395-y. Epub 2014 Jan 22.
2014 Mar degradation 9 3 GH31, CBM72, GH5_4, GH26
PUL0243 fosmid library screen, sequence homology analysis cellulose Prevotella sp. Sc00066 24448980
Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes. J Ind Microbiol Biotechnol. 2014 Mar;41(3):601-6. doi: 10.1007/s10295-013-1395-y. Epub 2014 Jan 22.
2014 Mar degradation 12 4 GH5_38, GH94, GH36
PUL0248 sequence homology analysis capsule polysaccharide Vibrio vulnificus 24102883
Role of capsular polysaccharide (CPS) in biofilm formation and regulation of CPS production by quorum-sensing in Vibrio vulnificus. Mol Microbiol. 2013 Nov;90(4):841-57. doi: 10.1111/mmi.12401. Epub 2013 Oct 10.
2013 Nov degradation 19 1 PL12_3, PL0
PUL0250 sequence homology analysis capsule polysaccharide Vibrio vulnificus 24102883
Role of capsular polysaccharide (CPS) in biofilm formation and regulation of CPS production by quorum-sensing in Vibrio vulnificus. Mol Microbiol. 2013 Nov;90(4):841-57. doi: 10.1111/mmi.12401. Epub 2013 Oct 10.
2013 Nov degradation 30 1 GT4, GT4, PL12, PL0, GT4
PUL0429 sequence homology analysis O-antigen, unknown polysaccharide Sinorhizobium meliloti 21396969
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. J Biotechnol. 2011 Aug 20;155(1):20-33. doi: 10.1016/j.jbiotec.2010.12.018. Epub 2011 Mar 17.
2011 Aug 20 biosynthesis 42 4 GT2, GT2, GT4, GT2
PUL0431 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia coli 27454490
Structure elucidation and gene cluster characterization of the O-antigen of Escherichia coli O80. Carbohydr Res. 2016 Sep 2;432:83-7. doi: 10.1016/j.carres.2016.07.011. Epub 2016 Jul 14.
2016 Sep 2 biosynthesis 18 4 GT26
PUL0432 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia coli 27645300
Structures and gene clusters of the O-specific polysaccharides of the lipopolysaccharides of Escherichia coli O69 and O146 containing glycolactilic acids: ether conjugates of D-GlcNAc and D-Glc with (R)- and (S)-lactic acid. Glycoconj J. 2017 Feb;34(1):71-84. doi: 10.1007/s10719-016-9730-y. Epub 2016 Sep 19.
2017 Feb biosynthesis 11 3 GT4, GT2
PUL0433 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia coli 27645300
Structures and gene clusters of the O-specific polysaccharides of the lipopolysaccharides of Escherichia coli O69 and O146 containing glycolactilic acids: ether conjugates of D-GlcNAc and D-Glc with (R)- and (S)-lactic acid. Glycoconj J. 2017 Feb;34(1):71-84. doi: 10.1007/s10719-016-9730-y. Epub 2016 Sep 19.
2017 Feb biosynthesis 12 3 GT2
PUL0446 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia albertii 28494314
Structure and gene cluster of the O-antigen of Escherichia albertii O1 resembling the O-antigen of Pseudomonas aeruginosa O5. Carbohydr Res. 2017 Jun 29;446-447:28-31. doi: 10.1016/j.carres.2017.04.024. Epub 2017 May 2.
2017 Jun 29 biosynthesis 17 2 GT4
PUL0447 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia albertii 28672166
Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7. Carbohydr Res. 2017 Sep 8;449:17-22. doi: 10.1016/j.carres.2017.06.008. Epub 2017 Jun 17.
2017 Sep 8 biosynthesis 14 4 GT4, GT4
PUL0448 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia albertii 28672166
Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7. Carbohydr Res. 2017 Sep 8;449:17-22. doi: 10.1016/j.carres.2017.06.008. Epub 2017 Jun 17.
2017 Sep 8 biosynthesis 19 4 GT4
PUL0449 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia albertii 28672166
Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7. Carbohydr Res. 2017 Sep 8;449:17-22. doi: 10.1016/j.carres.2017.06.008. Epub 2017 Jun 17.
2017 Sep 8 biosynthesis 13 4 GT4, GT2, GT4
PUL0450 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia albertii 28672166
Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7. Carbohydr Res. 2017 Sep 8;449:17-22. doi: 10.1016/j.carres.2017.06.008. Epub 2017 Jun 17.
2017 Sep 8 biosynthesis 14 3 GT52, GT2, GT2
PUL0451 sequence homology analysis, sugar utilization assay, NMR, gas chromatography and mass spectrometry O-antigen Streptococcus pneumoniae 28837839
Genetic and structural elucidation of capsular polysaccharides from Streptococcus pneumoniae serotype 23A and 23B, and comparison to serotype 23F. Carbohydr Res. 2017 Oct 10;450:19-29. doi: 10.1016/j.carres.2017.08.006. Epub 2017 Aug 18.
2017 Oct 10 biosynthesis 18 5 GT4
PUL0452 sequence homology analysis, sugar utilization assay, NMR, gas chromatography and mass spectrometry O-antigen Streptococcus pneumoniae 28837839
Genetic and structural elucidation of capsular polysaccharides from Streptococcus pneumoniae serotype 23A and 23B, and comparison to serotype 23F. Carbohydr Res. 2017 Oct 10;450:19-29. doi: 10.1016/j.carres.2017.08.006. Epub 2017 Aug 18.
2017 Oct 10 biosynthesis 18 5 GT4, GT2
PUL0453 sequence homology analysis, sugar utilization assay, NMR, gas chromatography and mass spectrometry O-antigen Streptococcus pneumoniae 28837839
Genetic and structural elucidation of capsular polysaccharides from Streptococcus pneumoniae serotype 23A and 23B, and comparison to serotype 23F. Carbohydr Res. 2017 Oct 10;450:19-29. doi: 10.1016/j.carres.2017.08.006. Epub 2017 Aug 18.
2017 Oct 10 biosynthesis 18 5 GT4
PUL0461 sequence homology analysis, sugar utilization assay, NMR O-antigen Yersinia kristensenii 31220629
Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii capital ES, Cyrillic-134. Carbohydr Res. 2019 Jul 15;481:9-15. doi: 10.1016/j.carres.2019.06.001. Epub 2019 Jun 6.
2019 Jul 15 biosynthesis 12 4 GT4, GT4, GT4
PUL0462 sequence homology analysis, sugar utilization assay, NMR O-antigen Escherichia coli 24607538
Structure elucidation and gene cluster annotation of the O-antigen of Escherichia coli O39; application of anhydrous trifluoroacetic acid for selective cleavage of glycosidic linkages. Carbohydr Res. 2014 Mar 31;388:30-6. doi: 10.1016/j.carres.2014.02.013. Epub 2014 Feb 18.
2014 Mar 31 biosynthesis 14 4 GT0, GT4, GT2
PUL0489 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 21 2 GT4
PUL0490 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 4 GT2, GT11
PUL0491 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 4 GT46, GT0
PUL0492 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 21 3 GT2, GT0
PUL0493 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 5 GT2, GT4, GT4, GT0, GT10, GT2
PUL0494 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 23 3 GT4, GT4, GT4
PUL0495 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 22 4 GT2, GT2, GT4, GT94, GT2
PUL0496 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 16 5 GT2, GT2, GT2, GT2
PUL0498 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 25 8 GT2, GT4, GT11, GT4, GT4, GT4, GT26
PUL0499 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 7 GT2, GT2, GT101, GT0, GT4, GT2, GT2, GT2
PUL0500 sequence homology analysis, microscopy O-glycan Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 9 4 GT4, GT0, GT94, GT4, GT4, GT2
PUL0501 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 9 3 GT2, GT4
PUL0502 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 5 GT11, GT2, GT2, GT4
PUL0503 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 16 6 GT11, GT4, GT2, GT4, CE4, CE0, GT4, GT2
PUL0504 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 16 5 GT2, GT2, GT2, GT11, GT0, GT10
PUL0505 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 5 GT4, GT4, GT4, GT2, GT2
PUL0506 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 15 4 GT8, GT2, GT2
PUL0507 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 19 4 PL12
PUL0509 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 6 GT2, GT4, GT2, GT2, GT2, GT10
PUL0510 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 27 7 GT2, GT2, GT2, GT2, GT4, GT4, GT26
PUL0511 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 6 GT2, GT2, GT4, GT2, GT2
PUL0512 sequence homology analysis, microscopy O-glycan Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 10 4 GT4, GT0, GT94, GT4, GT4, GT2
PUL0513 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 16 2 GT2, GT2
PUL0514 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 5 GT11, GT2, GT2, GT4
PUL0515 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 4 GT0, GT46
PUL0516 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 13 5 GT4, GT4, GT2, GT4
PUL0517 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 19 5 GT2, GT2, GT11, GT2
PUL0518 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 22 4 GT2, GT2, GT4, GT4
PUL0521 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 23 3 GT2, GT4
PUL0522 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 20 7 GT2, GT4, GT2, GT32, GT2, GT2
PUL0523 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 14 5 GT4, GT4, GT4, GT26
PUL0524 sequence homology analysis, microscopy capsule polysaccharide Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 13 7 GT2, GT2, GT4, GT101, GT0, GT4, GT2, GT2
PUL0525 sequence homology analysis, microscopy O-glycan Bacteroides fragilis 20829291
Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis. Microbiology (Reading). 2010 Nov;156(Pt 11):3255-3269. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.
2010 Nov biosynthesis 9 5 GT0, GT94, GT4, GT4, GT2
PUL0602 sequence homology analysis xylan Parageobacillus thermoglucosidasius 26442136
Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park. Stand Genomic Sci. 2015 Oct 5;10:73. doi: 10.1186/s40793-015-0031-z. eCollection 2015.
2015 degradation 26 6 CBM22, GH10, GH39, GH67, GH10, GH52, CE4