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You are here: Home > Substrate: alginate

alginate
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Alginates are from brown seaweeds, which are linear copolymers of MnA, β-1,4-D-mannuronic acid, and GlcA, α-1,4-L-guluronic acid. It exists as polyMnA, polyGlcA, or polyMnA−GlcA blocks.
References
Li, Jin, et al. "Insights into Algal Polysaccharides: A Review of Their Structure, Depolymerases, and Metabolic Pathways." Journal of Agricultural and Food Chemistry 70.6 (2022): 1749-1765. Click here to redirect detail information.

CAZyme Gene Cluster:
Substrate Genome_ID CGC_ID CGC_Content PUL_ID Species Name
alginate MGYG000003403 MGYG000003403_1|CGC2
PL6|PL6_1,PL17_2|PL17,2.A.1.14.25
PUL0053 Stenotrophomonas maltophilia
alginate MGYG000004708 MGYG000004708_20|CGC1
PL38,null,2.A.1.14.25,null,PL17|PL17_2,PL6|PL6_1,null,8.A.46.1.5,1.B.14.6.1
PUL0055
alginate MGYG000001313 MGYG000001313_17|CGC2
2.A.4.7.9,null,null,PL6|PL6_1,null,8.A.46.1.2,1.B.14.6.1,null,PL17|PL17_2,null,2.A.1.14.25
PUL0056 Bacteroides eggerthii
alginate MGYG000003711 MGYG000003711_3|CGC1
PL6|PL6_1,PL17_2|PL17,2.A.1.14.25
PUL0053 Stenotrophomonas maltophilia
alginate MGYG000000437 MGYG000000437_33|CGC1
PL38,null,2.A.1.14.25,null,PL17|PL17_2,PL6_1|PL6
PUL0199 Alistipes sp001941065
alginate MGYG000002381 MGYG000002381_61|CGC1
2.A.1.14.25,PL17|PL17_2,PL6|PL6_1,1.B.14.12.1,GntR,null,1.B.71.1.4,2.A.1.36.3
PUL0053 Stenotrophomonas bentonitica

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