dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02011
Location and strand information: 429710 - 430438 (+)
Family: 1.C.105.2.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02012
Location and strand information: 430595 - 431503 (+)
Family: 3.A.1.15.7
Protein type: TC
Protein description: Manganese ABC transporter substrate-binding lipoprotein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02013
Location and strand information: 431631 - 432350 (-)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.1745
Protein molecular weight: 25960.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02014
Location and strand information: 432587 - 433753 (-)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7282
Protein molecular weight: 42000.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02015
Location and strand information: 433828 - 434025 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02016
Location and strand information: 434082 - 435032 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02017
Location and strand information: 438137 - 439321 (+)
Family: 2.A.1.68.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02018
Location and strand information: 439509 - 441395 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3796
Protein molecular weight: 72146.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02019
Location and strand information: 441663 - 442658 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02020
Location and strand information: 442803 - 443702 (-)
Family: GH43_22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6939
Protein molecular weight: 34346.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02021
Location and strand information: 444056 - 445867 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-glucuronidase
Protein isoelectric point: 4.8812
Protein molecular weight: 69463.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02022
Location and strand information: 446000 - 448546 (+)
Family: GH59
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8323
Protein molecular weight: 96530.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02023
Location and strand information: 448622 - 449206 (-)
Family: null
Protein type: null
Protein description: LOG family protein YvdD

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02024
Location and strand information: 449345 - 450415 (+)
Family: null
Protein type: null
Protein description: Aminopeptidase YpdF

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02025
Location and strand information: 450855 - 451418 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02026
Location and strand information: 451422 - 453155 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02027
Location and strand information: 453130 - 453969 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02028
Location and strand information: 454042 - 454767 (+)
Family: null
Protein type: null
Protein description: Putative glutamine amidotransferase

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02029
Location and strand information: 454878 - 455228 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001333.1_106|CGC4
Gene ID: MGYG000001333.1_02030
Location and strand information: 455251 - 456168 (+)
Family: 2.A.7.3.31
Protein type: TC
Protein description: putative inner membrane transporter YicL

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001333.1_02011	hypothetical protein	TC	429710	430438	+	1.C.105.2.6
MGYG000001333.1_02012	Manganese ABC transporter substrate-binding lipoprotein	TC	430595	431503	+	3.A.1.15.7
MGYG000001333.1_02013	hypothetical protein	CAZyme	431631	432350	-	GH25
MGYG000001333.1_02014	hypothetical protein	CAZyme	432587	433753	-	GH25
MGYG000001333.1_02015	hypothetical protein	null	433828	434025	-	No domain
MGYG000001333.1_02016	HTH-type transcriptional activator RhaS	TF	434082	435032	-	HTH_AraC+HTH_AraC
MGYG000001333.1_02017	hypothetical protein	TC	438137	439321	+	2.A.1.68.1
MGYG000001333.1_02018	hypothetical protein	CAZyme	439509	441395	+	GH154
MGYG000001333.1_02019	HTH-type transcriptional regulator LacR	TF	441663	442658	+	LacI
MGYG000001333.1_02020	hypothetical protein	CAZyme	442803	443702	-	GH43_22
MGYG000001333.1_02021	Beta-glucuronidase	CAZyme	444056	445867	+	GH2
MGYG000001333.1_02022	hypothetical protein	CAZyme	446000	448546	+	GH59
MGYG000001333.1_02023	LOG family protein YvdD	null	448622	449206	-	Lysine_decarbox
MGYG000001333.1_02024	Aminopeptidase YpdF	null	449345	450415	+	Creatinase_N\| Peptidase_M24
MGYG000001333.1_02025	hypothetical protein	TC	450855	451418	+	3.A.1.29.1
MGYG000001333.1_02026	Putative HMP/thiamine import ATP-binding protein YkoD	TC	451422	453155	+	3.A.1.29.1
MGYG000001333.1_02027	Energy-coupling factor transporter transmembrane protein EcfT	TC	453130	453969	+	3.A.1.29.1
MGYG000001333.1_02028	Putative glutamine amidotransferase	null	454042	454767	+	Peptidase_C26
MGYG000001333.1_02029	hypothetical protein	null	454878	455228	+	DUF1801
MGYG000001333.1_02030	putative inner membrane transporter YicL	TC	455251	456168	+	2.A.7.3.31
Protein ID	Protein Name	Type	Start	End	Strand	Signature