dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01379
Location and strand information: 109577 - 110809 (+)
Family: 3.A.1.125.1
Protein type: TC
Protein description: Lipoprotein-releasing system transmembrane protein LolE

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01380
Location and strand information: 111072 - 114575 (+)
Family: GH43|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.848
Protein molecular weight: 132509.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01381
Location and strand information: 114661 - 118710 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01382
Location and strand information: 119245 - 122319 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01383
Location and strand information: 122340 - 124064 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01384
Location and strand information: 124081 - 126804 (+)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1509
Protein molecular weight: 101746.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01385
Location and strand information: 126820 - 128226 (+)
Family: GH79
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5244
Protein molecular weight: 52219.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01386
Location and strand information: 128229 - 130304 (+)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 6.7834
Protein molecular weight: 78912.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01387
Location and strand information: 130316 - 133015 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.5794
Protein molecular weight: 102663.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01388
Location and strand information: 133012 - 135609 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 7.3383
Protein molecular weight: 100221.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01389
Location and strand information: 135632 - 135844 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01390
Location and strand information: 135929 - 136822 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 6.6911
Protein molecular weight: 33741.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01391
Location and strand information: 136836 - 138299 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9648
Protein molecular weight: 53023.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01392
Location and strand information: 138304 - 143070 (+)
Family: CBM67|PL8_3|PL8|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9704
Protein molecular weight: 178557.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01393
Location and strand information: 143187 - 143945 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein YpdB

Gene clsuter ID: MGYG000002455_5|CGC3
Gene ID: MGYG000002455_01394
Location and strand information: 143959 - 144963 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002455_01379	Lipoprotein-releasing system transmembrane protein LolE	TC	109577	110809	+	3.A.1.125.1
MGYG000002455_01380	hypothetical protein	CAZyme	111072	114575	+	GH43\| GH106
MGYG000002455_01381	Sensor histidine kinase RcsC	TF	114661	118710	-	HTH_AraC
MGYG000002455_01382	TonB-dependent receptor SusC	TC	119245	122319	+	1.B.14.6.1
MGYG000002455_01383	hypothetical protein	TC	122340	124064	+	8.A.46.1.6
MGYG000002455_01384	hypothetical protein	CAZyme	124081	126804	+	PL8_3\| PL8
MGYG000002455_01385	hypothetical protein	CAZyme	126820	128226	+	GH79
MGYG000002455_01386	Chondroitinase-AC	CAZyme	128229	130304	+	PL8_3\| PL8
MGYG000002455_01387	Exo-beta-D-glucosaminidase	CAZyme	130316	133015	+	GH2
MGYG000002455_01388	Exo-beta-D-glucosaminidase	CAZyme	133012	135609	+	GH2
MGYG000002455_01389	hypothetical protein	null	135632	135844	+	No domain
MGYG000002455_01390	Unsaturated chondroitin disaccharide hydrolase	CAZyme	135929	136822	+	GH88
MGYG000002455_01391	hypothetical protein	CAZyme	136836	138299	+	GH28
MGYG000002455_01392	hypothetical protein	CAZyme	138304	143070	+	CBM67\| PL8_3\| PL8\| GH78
MGYG000002455_01393	Transcriptional regulatory protein YpdB	TF	143187	143945	+	LytTR
MGYG000002455_01394	hypothetical protein	TC	143959	144963	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature