dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003504_14|CGC1
Gene ID: MGYG000003504_00256
Location and strand information: 10908 - 12482 (-)
Family: GH20
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 6.386
Protein molecular weight: 59693.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003504_14|CGC1
Gene ID: MGYG000003504_00257
Location and strand information: 12669 - 14351 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003504_14|CGC1
Gene ID: MGYG000003504_00258
Location and strand information: 14348 - 15157 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YdcV

Gene clsuter ID: MGYG000003504_14|CGC1
Gene ID: MGYG000003504_00259
Location and strand information: 15154 - 15948 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000003504_14|CGC1
Gene ID: MGYG000003504_00260
Location and strand information: 15938 - 17401 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003504_00256	Beta-hexosaminidase	CAZyme	10908	12482	-	GH20
MGYG000003504_00257	hypothetical protein	STP	12669	14351	-	SBP_bac_1
MGYG000003504_00258	Inner membrane ABC transporter permease protein YdcV	TC	14348	15157	-	3.A.1.11.8
MGYG000003504_00259	Spermidine/putrescine transport system permease protein PotB	TC	15154	15948	-	3.A.1.11.8
MGYG000003504_00260	Vitamin B12 import ATP-binding protein BtuD	TC	15938	17401	-	3.A.1.11.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature