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CAZyme Information: MGYG000002619_00888

You are here: Home > Sequence: MGYG000002619_00888

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Faecalibacterium prausnitzii_J
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Faecalibacterium; Faecalibacterium prausnitzii_J
CAZyme ID MGYG000002619_00888
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
265 MGYG000002619_3|CGC1 28096.25 10.4301
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002619 2724245 MAG China Asia
Gene Location Start: 205869;  End: 206666  Strand: +

Full Sequence      Download help

MKSVAQTVIE  ADRFYTIAAH  TGNVIQAVEG  SKDGGTVRLG  KYDHKPEQEW  SFVREGDGVY60
RIRNRASGKL  LDLTMTGTAN  GTWLHLWEDV  GGTSQMWKVE  HTPEGTVRLR  SSWAGGKCVD120
TVGMGAEVGA  VLQIWQEVPG  GGDQLWVISE  VKDRVKRAAK  VEEAPAPAAE  TTAAPAKEAA180
PAKKPAARKP  RTTKKVEEKP  AAPTAKAAEP  VKAEKPAAKK  SAKAKAEPAA  PAAEVKAVPV240
AEAKTAPAAA  KPKAKRAPCK  KTVKK265

Enzyme Prediction      help

No EC number prediction in MGYG000002619_00888.

CAZyme Signature Domains help

Created with Snap1326395366799210611913214515917218519821222523825113158CBM13
Family Start End Evalue family coverage
CBM13 13 158 1.4e-22 0.7287234042553191

CDD Domains      download full data without filtering help

Created with Snap1326395366799210611913214515917218519821222523825146135RicinB_lectin_21587RicinB_lectin_259155Ricin_B_lectin27146lectin_12898RICIN
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 2.13e-23 46 135 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 8.94e-15 15 87 15 89
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 6.35e-09 59 155 2 91
Ricin-type beta-trefoil lectin domain.
NF035929 lectin_1 4.68e-08 27 146 727 834
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
cd00161 RICIN 1.08e-07 28 98 57 123
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Created with Snap132639536679921061191321451591721851982122252382511162CBL01046.1|CBM131162AXB28205.1|CBM131166CBK97866.1|CBM131166AXA82809.1|CBM131165ATO98528.1|CBM13
Hit ID E-Value Query Start Query End Hit Start Hit End
CBL01046.1 1.35e-113 1 162 1 162
AXB28205.1 4.00e-113 1 162 1 162
CBK97866.1 6.99e-67 1 166 30 194
AXA82809.1 6.99e-67 1 166 30 194
ATO98528.1 6.76e-64 1 165 1 165

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002619_00888.