CAZyme Information: MGYG000000127_05197

Basic Information

• Species: Catenibacillus sp902363555
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Catenibacillus; Catenibacillus sp902363555
• CAZyme ID: MGYG000000127_05197
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
851	MGYG000000127_13|CGC2	96245.32	6.4626

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000127	6637359	Isolate	Canada	North America

• Gene Location: Start: 89737; End: 92292 Strand: -

Full Sequence      

MKAIRLRTEYLNNPLGIDVQHPRLFWNCEDGTAQTAYQILCRNAGGTVWDSGKVASFSMQ
AVYPHALASRERITWQVRLWDEQDMSGPWSEMAVFEMGLLKPSDWKAGWITGDYKVNKRQ
RYPVDCFRKTFHVSDGGNARLYITACGLYEAVINGCRVGAFVMAPGHTDYRRRISYQTYD
ITGLVHPGENVCEIQLADGWYRGSCGAWGLKNQYGRETRVIAQLELDGRPMVCTDDCWDW
SNDGPLRFADNKDGEIVDARNEPTYNGKARTTQHSVLPSASNNVQVLEHERFAPAVITTP
GGRTVLDFGQNMAGFVEFSVNARAGQRVFLRMGELLQKDGEFTQSNIQCSSKRRTTPLQQ
IEYRCKDGENHYKTKFAVFGFRYALLETDTDWSPENFTAIAVYSDLEQTGFFQSSNRLLD
QFVKNTVWSSKSNFLDVPTDCPTRERHGWTGDSQIFFDTASYLFDYAAFAKKHLCDIYDW
QKKDGNLPQIAPEGGVDSYMATLNGSPGWSDIGILLPYRFWKKYGDREILKQYYEGMKKY
AAFLHRRCGKKTPLSRPLGLHGDDRKYAVNYGQSYGEWAEPADVFPNKWTDMVLPHPEVS
TAYTAWCFGLFGEMAAELGDVATAEEYSQLSKKVTASYQAMRRLPEFSLDTDRQAMLVRP
LFLDLLDNEQKSYARQRLLKALEHYGWRLGTGFLSTPLILDVLTDIDTEAAFRLLENEEM
PGWLFMPKAGATTVWESWEGSSAQSGIGSLNHYSKGAVCAWLFESMCGIRIAGANEFNIA
PHVGGHFTHAKASYQSIYGKVESGWERRDGKTVYTISIPSNCQAKIILPGGRTEITGSGV
HIYEESCSNDY

Enzyme Prediction     

No EC number prediction in MGYG000000127_05197.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	297	828	4.1e-136	0.996031746031746
CBM67	108	263	2.3e-23	0.8352272727272727

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.56e-88	407	766	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	1.05e-39	139	264	6	135	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	1.76e-19	297	403	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	4.49e-14	768	842	1	77	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AHF25263.1	0.0	1	845	1	846
QFJ55302.1	0.0	1	839	1	859
QUC03017.1	0.0	1	841	1	878
ADP81465.1	4.31e-275	1	843	1	860
AWI66986.1	1.90e-263	1	827	7	844

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	5.31e-113	1	834	1	1000	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	1.54e-109	6	829	35	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	7.02e-104	9	847	10	867	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNB2	1.78e-116	8	834	41	884	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
Q82PP4	2.27e-112	1	834	1	1000	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
P9WF03	5.59e-102	13	829	42	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	8.88e-70	12	834	41	912	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000034	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000127_05197.