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CAZyme Information: MGYG000000289_00520

You are here: Home > Sequence: MGYG000000289_00520

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella buccae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella buccae
CAZyme ID MGYG000000289_00520
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
459 50942.51 8.0518
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000289 3001000 MAG Sweden Europe
Gene Location Start: 72941;  End: 74320  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000289_00520.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 79 424 6.8e-75 0.9015384615384615

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.15e-76 21 351 59 392
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.60e-18 198 347 85 229
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 9.18e-16 17 369 4 303
Probable polygalacturonase At3g15720
PLN03010 PLN03010 3.07e-13 50 454 52 392
polygalacturonase
PLN02188 PLN02188 5.86e-12 34 445 28 379
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAJ19131.1 7.61e-210 28 458 18 448
ADY35504.1 1.42e-201 22 459 25 462
QCD42468.1 7.43e-200 28 459 45 475
AGK84773.1 4.58e-199 28 458 48 477
AND21958.1 4.52e-198 26 459 10 443

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 5.37e-81 29 442 12 433
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.20e-72 41 425 41 432
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 7.60e-17 48 418 14 361
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 4.25e-30 47 418 65 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 9.44e-19 201 342 25 170
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P18192 2.67e-17 48 418 40 387
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 5.03e-16 48 418 40 387
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
P48979 2.82e-09 46 418 29 365
Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000269 0.999052 0.000170 0.000168 0.000160 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000289_00520.