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CAZyme Information: MGYG000000473_01542

You are here: Home > Sequence: MGYG000000473_01542

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA10281 sp900767495
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UBA10281; UBA10281 sp900767495
CAZyme ID MGYG000000473_01542
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
748 85819.82 5.2748
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000473 1843328 MAG Fiji Oceania
Gene Location Start: 1560;  End: 3806  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000473_01542.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 256 722 8.2e-44 0.9067460317460317

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.15e-07 346 690 7 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUH27875.1 4.27e-154 26 748 37 767
AJY74261.1 9.71e-142 24 721 47 756
QGY42778.1 1.55e-141 30 747 73 805
QDH81296.1 3.27e-139 26 745 63 799
QNK54884.1 1.22e-134 10 745 25 774

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000473_01542.