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CAZyme Information: MGYG000000815_00461

You are here: Home > Sequence: MGYG000000815_00461

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas capnocytophagoides
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas capnocytophagoides
CAZyme ID MGYG000000815_00461
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 MGYG000000815_1|CGC6 47129.61 5.0144
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000815 4510901 MAG China Asia
Gene Location Start: 553896;  End: 555191  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 255 9.3e-81 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.38e-07 4 215 12 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 2.40e-05 84 236 12 163
Amb_all domain.
pfam18884 TSP3_bac 5.11e-04 384 405 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY54248.1 6.17e-216 20 428 28 442
ALJ59319.1 3.20e-175 5 428 4 457
ADY37134.1 1.17e-173 12 428 10 430
QCD40703.1 1.33e-163 11 428 2 453
QCP73753.1 1.33e-163 11 428 2 453

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.20e-65 23 428 21 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 6.94e-64 23 428 21 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 1.83e-63 23 428 21 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 2.56e-63 3 428 2 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 4.26e-61 11 428 8 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000264 0.999106 0.000149 0.000161 0.000155 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000815_00461.