CAZyme Information: MGYG000000858_01606

Basic Information

• Species: Collinsella sp900542155
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900542155
• CAZyme ID: MGYG000000858_01606
• CAZy Family: CBM13
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1187		125316.16	4.5594

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000858	2197901	MAG	China	Asia

• Gene Location: Start: 10228; End: 13791 Strand: -

Full Sequence      

MRHKKRVCIAMQTGLLLGLLLILPVVLKSGSTAFAEVSPAGPSVEEAVKAEDVNDSFRDS
SLGDSAHDDSATDEDAGVESESSAEAADLSSYSTLDTGIYFLTSTLSGHRVLDVAGGSVG
AGVAIQLYGRNETAAQQFILEDLGDARYAFKNVKSGLYLCYPNDVSYFSDHPLLTQCAGD
SDAWGFAWHARQVGNGFIFSPVIDDDYAIDIAGANDADGIQIRLYQANEPAAQIFTLEKP
KTTIIAELAAAHASDLADGTYLIRSAKSRWQTLDVAGGSRSSGANVQIYALNASSAQTWT
VSHDSDGFVTLTCKGSGLVLDVSGGSAHSGTNVRQYASNGSAAQKWIAVKDGDSIKLISA
LDPSICLDIAGGNTANGANVRTWSVNGTSAQRWSFYDLNAQREELDMLAQQNAGNIADGR
YILALGVGKTKVLDVSGGSKDNGGNVQSYASNMTSAQQWVISHDESGYLIIRNVSSGRVL
DIAGGSCSLGTNVQQYSFNGSRAQRWIAVPSASAGLFRLQSALMTDIVLDVAGGSSSNGA
NIQTYANNGTPAQNVRFVSTAPDVAPCSDLGLDGWFTISLATDLSRVFDIAGGSSSNGAN
VQTYAANGTFAQDFKFVYEGGYYRIVSAQSGKALDVDGGNLCPGTNVHQWNIGSNNANQL
FSIVRNDDGSYTATNKATGLVLTVESSNVFGDSPTDSGSQSLAFTKVTSLLPEGFFTISN
SASSSAVLDVAGGSAADGANVQLYGSNKSLAQKWKITKVAERDNTYTIESLVSGKVLTAD
EDDNVCVRSQTNDDFQLWTAQINNGCAVLANVATGKVLDAAGGLTSNGTNIGMYASNGTA
AQSFKLSTCSLVDSGTYTIVVASDRSKALDVAGGSRSNGANVQLWSSNGSGAQKWNVSAN
SDGTVSIQNCRSKKYLDVLNAQGVSGTNVQQWQGNGSSAQRWRVDYVGGGSFVIRSVLNE
TLVLDVSGGAFGDGANIQIYNSNNSGAQGFTFVQTSYTPEAVDLAVPVYNQYSVGLPNGC
ESAALTNVLNYYGFGVGPCEMADRWIPRSSWDFVWCFWGDPHSYSNGNEICAPGLNKAAN
NFLASRGSSLRSYDVSGTSLYDLCKYLDDGYPVIIWTTVHQGNVGNIYARQGGYFACVNS
HTVVLKGYDPQTNKVMISDTIDGYTTYDRDWIAWVYQQRGAQAVVIK

Enzyme Prediction     

No EC number prediction in MGYG000000858_01606.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM13	366	508	1.5e-22	0.6170212765957447
CBM13	213	358	2.1e-20	0.6595744680851063
CBM13	808	933	3.6e-20	0.6063829787234043
CBM13	900	997	6.2e-18	0.5
CBM13	592	687	1.3e-17	0.4946808510638298

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13529	Peptidase_C39_2	2.99e-21	1006	1159	2	138	Peptidase_C39 like family.
pfam14200	RicinB_lectin_2	3.95e-21	892	980	2	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.41e-20	455	545	1	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	6.48e-19	295	383	1	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	7.24e-18	852	932	10	89	Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRT49575.1	2.24e-192	404	1187	270	1061
BAK44091.1	2.96e-69	248	997	131	885
QRT49576.1	2.94e-51	397	914	406	928
QOL34941.1	9.91e-26	102	467	614	978
AMK55176.1	1.63e-22	100	467	517	884

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5B2H_A	1.37e-06	763	895	147	278	Crystalstructure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum],5B2H_B Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34735	1.67e-07	1001	1187	59	249	Uncharacterized protein YvpB OS=Bacillus subtilis (strain 168) OX=224308 GN=yvpB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.007792	0.990374	0.001074	0.000298	0.000225	0.000214

TMHMM  Annotations     

start	end
7	26