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CAZyme Information: MGYG000000861_00912

You are here: Home > Sequence: MGYG000000861_00912

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Olsenella_B sp900548775
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella_B; Olsenella_B sp900548775
CAZyme ID MGYG000000861_00912
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
407 MGYG000000861_14|CGC1 44087.43 4.8069
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000861 2145101 MAG China Asia
Gene Location Start: 30585;  End: 31808  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000861_00912.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 29 353 3e-31 0.92

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.16e-26 11 228 92 342
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.13e-07 34 223 7 176
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.09e-06 113 244 133 276
polygalacturonase
pfam13229 Beta_helix 7.28e-06 142 246 2 110
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PLN02155 PLN02155 1.13e-04 139 220 144 231
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUC03291.1 1.08e-211 1 404 1 402
AEB07770.1 3.31e-161 2 403 5 406
AUJ85227.1 1.09e-84 18 355 24 360
QED59087.1 1.70e-78 18 373 25 394
ASG79845.1 3.17e-77 18 378 23 377

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000036 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000861_00912.