logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001433_00965

You are here: Home > Sequence: MGYG000001433_00965

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides salyersiae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides salyersiae
CAZyme ID MGYG000001433_00965
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
403 MGYG000001433_1|CGC25 46217.48 6.2645
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001433 5309986 Isolate not provided not provided
Gene Location Start: 1192029;  End: 1193240  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 53 399 9.7e-124 0.9849397590361446

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 8.70e-132 35 400 1 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 3.53e-107 39 400 19 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77835.1 8.18e-311 1 403 1 403
QJR67845.1 1.43e-225 4 400 1 397
QJR63583.1 1.43e-225 4 400 1 397
AND20254.1 1.43e-225 4 400 1 397
QUT83569.1 1.43e-225 4 400 1 397

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 1.11e-102 61 400 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 2.44e-96 60 400 38 367
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 1.01e-95 60 400 28 357
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3K11_A 4.57e-15 149 366 183 386
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4Q88_A 1.28e-14 116 396 91 353
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 1.34e-95 60 400 38 367
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 2.49e-40 172 396 1 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 2.49e-40 172 396 1 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
O31521 6.25e-14 61 306 29 262
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000805 0.102712 0.896259 0.000069 0.000081 0.000071

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001433_00965.