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CAZyme Information: MGYG000001657_01234

You are here: Home > Sequence: MGYG000001657_01234

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900760425
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900760425
CAZyme ID MGYG000001657_01234
CAZy Family GH105
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
807 MGYG000001657_63|CGC1 90572.17 6.4364
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001657 2980281 MAG United States North America
Gene Location Start: 5920;  End: 8343  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001657_01234.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 58 401 2.9e-110 0.9668674698795181
PL1 481 669 3.4e-72 0.9836065573770492

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 2.96e-95 34 403 1 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 1.50e-93 37 401 9 354
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.50e-12 494 675 15 190
Amb_all domain.
COG3866 PelB 8.02e-10 441 646 48 246
Pectate lyase [Carbohydrate transport and metabolism].
pfam13229 Beta_helix 6.02e-05 541 657 24 143
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63671.1 1.17e-133 3 399 3 395
QUT93209.1 4.95e-113 21 413 13 406
ALJ61262.1 4.95e-113 21 413 13 406
QDO69177.1 1.38e-112 21 413 13 406
BBE19946.1 1.53e-111 35 400 33 393

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 2.38e-96 61 403 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 1.30e-56 60 403 38 367
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 4.98e-56 60 403 28 357
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3K11_A 2.80e-20 144 408 178 418
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
3QWT_A 4.09e-13 148 331 146 319
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 7.11e-56 60 403 38 367
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
B8NQQ7 3.49e-41 430 784 22 344
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 3.05e-40 424 784 17 345
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 5.64e-40 424 784 17 345
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 5.64e-40 424 784 17 345
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000475 0.998709 0.000259 0.000185 0.000177 0.000169

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001657_01234.