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CAZyme Information: MGYG000002170_00119
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_Q; | |||||||||||
| CAZyme ID | MGYG000002170_00119 | |||||||||||
| CAZy Family | CBM32 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 28527; End: 31940 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM32 | 303 | 432 | 1.2e-24 | 0.9516129032258065 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 7.30e-26 | 300 | 432 | 1 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| COG5263 | COG5263 | 2.20e-15 | 1015 | 1136 | 207 | 313 | Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism]. |
| cd00057 | FA58C | 2.79e-15 | 301 | 413 | 14 | 126 | Substituted updates: Jan 31, 2002 |
| NF033840 | PspC_relate_1 | 5.90e-12 | 1020 | 1137 | 522 | 648 | PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC. |
| NF033930 | pneumo_PspA | 3.97e-10 | 1026 | 1136 | 545 | 660 | pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CAD19366.1 | 1.89e-115 | 3 | 583 | 1052 | 1625 |
| AAP64961.1 | 1.89e-115 | 3 | 583 | 1052 | 1625 |
| ABI07182.1 | 1.89e-115 | 3 | 583 | 1052 | 1625 |
| CAC14566.2 | 1.89e-115 | 3 | 583 | 1052 | 1625 |
| ABE27152.1 | 7.05e-114 | 3 | 561 | 1052 | 1598 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7NIT_A | 2.93e-58 | 3 | 293 | 1020 | 1304 | ChainA, Beta-galactosidase [Bifidobacterium bifidum],7NIT_B Chain B, Beta-galactosidase [Bifidobacterium bifidum],7NIT_C Chain C, Beta-galactosidase [Bifidobacterium bifidum],7NIT_D Chain D, Beta-galactosidase [Bifidobacterium bifidum],7NIT_E Chain E, Beta-galactosidase [Bifidobacterium bifidum],7NIT_F Chain F, Beta-galactosidase [Bifidobacterium bifidum] |
| 2J7M_A | 2.84e-22 | 299 | 434 | 11 | 147 | Characterizationof a Family 32 CBM [Clostridium perfringens] |
| 2J1A_A | 2.92e-22 | 299 | 434 | 12 | 148 | Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124] |
| 2V5D_A | 2.11e-19 | 299 | 434 | 599 | 735 | Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens] |
| 2ZXQ_A | 4.40e-17 | 266 | 439 | 1185 | 1376 | Crystalstructure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) [Bifidobacterium longum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q0TR53 | 1.27e-21 | 299 | 490 | 629 | 819 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1 |
| Q8XL08 | 1.67e-21 | 299 | 490 | 629 | 819 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1 |
| P29767 | 2.80e-14 | 277 | 447 | 32 | 197 | Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1 |
| Q2MGH6 | 6.70e-13 | 210 | 472 | 1415 | 1665 | Endo-alpha-N-acetylgalactosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=SP_0368 PE=1 SV=1 |
| Q8DR60 | 3.40e-12 | 210 | 472 | 1415 | 1665 | Endo-alpha-N-acetylgalactosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=spr0328 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999996 | 0.000032 | 0.000003 | 0.000000 | 0.000000 | 0.000000 |