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CAZyme Information: MGYG000002273_00090
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides stercorirosoris | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercorirosoris | |||||||||||
| CAZyme ID | MGYG000002273_00090 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 110812; End: 112299 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 52 | 403 | 9.3e-58 | 0.9538461538461539 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.05e-56 | 25 | 352 | 83 | 439 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 2.16e-10 | 14 | 314 | 36 | 312 | polygalacturonase |
| pfam12708 | Pectate_lyase_3 | 9.19e-07 | 26 | 286 | 3 | 210 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| PLN02793 | PLN02793 | 2.30e-06 | 29 | 280 | 57 | 331 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 5.82e-06 | 26 | 314 | 69 | 347 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT88702.1 | 0.0 | 1 | 493 | 1 | 493 |
| AHF16111.1 | 1.39e-230 | 21 | 493 | 20 | 492 |
| BCG53462.1 | 2.50e-227 | 1 | 495 | 1 | 496 |
| QUT49882.1 | 5.05e-226 | 8 | 493 | 7 | 492 |
| QGA27491.1 | 3.67e-221 | 10 | 493 | 4 | 489 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4MXN_A | 3.65e-41 | 21 | 253 | 18 | 236 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 5OLP_A | 5.43e-33 | 23 | 309 | 43 | 357 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.24e-27 | 23 | 342 | 26 | 383 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 4.45e-20 | 18 | 408 | 150 | 548 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15922 | 1.81e-21 | 26 | 409 | 153 | 542 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| A7PZL3 | 1.24e-19 | 10 | 420 | 48 | 451 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q02096 | 2.68e-07 | 24 | 320 | 84 | 393 | Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1 |
| Q8RY29 | 5.88e-07 | 26 | 308 | 69 | 346 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| Q9ZFG9 | 1.95e-06 | 24 | 134 | 2 | 130 | Alginate lyase 7 OS=Azotobacter vinelandii OX=354 GN=algE7 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000436 | 0.997620 | 0.001306 | 0.000208 | 0.000200 | 0.000187 |