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CAZyme Information: MGYG000002291_02165

You are here: Home > Sequence: MGYG000002291_02165

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species OM05-12 sp003438995
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; OM05-12; OM05-12 sp003438995
CAZyme ID MGYG000002291_02165
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
653 70466.51 5.3869
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002291 4475595 Isolate China Asia
Gene Location Start: 98674;  End: 100635  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002291_02165.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 62 271 2.4e-44 0.9158415841584159

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.53e-41 7 338 8 342
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.78e-25 67 248 3 165
Amb_all domain.
pfam00544 Pec_lyase_C 1.68e-13 82 259 31 203
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOW10430.1 6.93e-78 7 380 4 367
ABG58437.1 4.42e-75 1 341 1 336
QYR11586.1 2.56e-74 16 344 32 361
AGS52468.1 2.96e-74 1 350 1 345
QLC65122.1 5.65e-74 11 369 6 353

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1BN8_A 6.79e-19 8 338 11 417
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
5AMV_A 7.55e-19 22 338 1 396
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
3KRG_A 1.35e-18 22 338 1 396
ChainA, Pectate lyase [Bacillus subtilis]
2BSP_A 1.62e-18 8 338 11 417
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]
2NZM_A 4.33e-18 22 338 1 396
ChainA, Pectate lyase [Bacillus subtilis],2O04_A Chain A, Pectate lyase [Bacillus subtilis],2O0V_A Chain A, Pectate lyase [Bacillus subtilis],2O0W_A Chain A, Pectate lyase [Bacillus subtilis],2O17_A Chain A, Pectate lyase [Bacillus subtilis],2O1D_A Chain A, Pectate lyase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2TZY0 1.37e-21 40 270 48 258
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1
B8NBC2 1.37e-21 40 270 48 258
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1
Q9WYR4 3.34e-21 30 264 31 256
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
Q0CBV0 6.01e-21 40 270 47 257
Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1
B1L969 7.92e-21 30 264 29 254
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000454 0.998660 0.000195 0.000229 0.000211 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002291_02165.