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CAZyme Information: MGYG000002474_02864
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rahnella variigena | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Rahnella; Rahnella variigena | |||||||||||
| CAZyme ID | MGYG000002474_02864 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 77379; End: 78659 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 96 | 379 | 3.1e-53 | 0.7847222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10531 | PRK10531 | 9.21e-157 | 1 | 419 | 1 | 416 | putative acyl-CoA thioester hydrolase. |
| COG4677 | PemB | 3.98e-98 | 1 | 419 | 1 | 398 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 1.69e-14 | 98 | 366 | 23 | 221 | putative pectinesterase |
| PLN02773 | PLN02773 | 9.71e-14 | 94 | 356 | 12 | 224 | pectinesterase |
| PLN02671 | PLN02671 | 2.44e-12 | 95 | 356 | 68 | 279 | pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZP43143.1 | 1.44e-293 | 1 | 426 | 1 | 426 |
| AFE59345.1 | 1.44e-293 | 1 | 426 | 1 | 426 |
| QQN36857.1 | 1.44e-293 | 1 | 426 | 1 | 426 |
| AZP47482.1 | 1.44e-293 | 1 | 426 | 1 | 426 |
| AYA07917.1 | 1.44e-293 | 1 | 426 | 1 | 426 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3GRH_A | 2.01e-105 | 25 | 419 | 22 | 409 | Crystalstructure of escherichia coli ybhc [Escherichia coli K-12] |
| 4PMH_A | 3.22e-70 | 32 | 419 | 2 | 361 | Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q47474 | 4.94e-138 | 11 | 418 | 11 | 426 | Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2 |
| P55743 | 1.71e-130 | 35 | 420 | 7 | 397 | Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2 |
| P46130 | 1.14e-105 | 5 | 419 | 5 | 414 | Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2 |
| E7CIP7 | 2.77e-69 | 32 | 419 | 18 | 377 | Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1 |
| P24791 | 1.14e-32 | 34 | 420 | 27 | 390 | Pectinesterase OS=Ralstonia solanacearum OX=305 GN=pme PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000001 | 1.000042 | 0.000000 | 0.000000 | 0.000000 |