You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002496_01274
You are here: Home > Sequence: MGYG000002496_01274
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Salmonella bongori | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella bongori | |||||||||||
| CAZyme ID | MGYG000002496_01274 | |||||||||||
| CAZy Family | GH19 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 203510; End: 205273 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH19 | 83 | 340 | 4.5e-76 | 0.9956709956709957 |
| CBM73 | 535 | 585 | 2.4e-21 | 0.9444444444444444 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00325 | chitinase_GH19 | 4.21e-74 | 91 | 340 | 1 | 224 | Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence. |
| COG3979 | COG3979 | 3.24e-41 | 24 | 225 | 1 | 181 | Chitodextrinase [Carbohydrate transport and metabolism]. |
| pfam00182 | Glyco_hydro_19 | 8.13e-37 | 107 | 331 | 25 | 225 | Chitinase class I. |
| pfam18911 | PKD_4 | 8.28e-09 | 421 | 505 | 3 | 81 | PKD domain. This entry is composed of PKD domains found in bacterial surface proteins. |
| PRK13211 | PRK13211 | 3.23e-07 | 457 | 587 | 337 | 477 | N-acetylglucosamine-binding protein GbpA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGR57424.1 | 0.0 | 1 | 587 | 1 | 587 |
| QXY84513.1 | 0.0 | 1 | 587 | 1 | 587 |
| AID24075.1 | 0.0 | 1 | 587 | 1 | 587 |
| QVP36597.1 | 0.0 | 1 | 587 | 1 | 587 |
| QUZ58169.1 | 0.0 | 1 | 587 | 1 | 587 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2BAA_A | 1.32e-31 | 107 | 330 | 29 | 228 | TheRefined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution [Hordeum vulgare] |
| 7V92_A | 1.90e-31 | 107 | 330 | 29 | 228 | ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa] |
| 7V91_A | 1.90e-31 | 107 | 330 | 29 | 228 | ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa] |
| 1CNS_A | 1.64e-30 | 107 | 330 | 29 | 228 | CrystalStructure Of Chitinase At 1.91a Resolution [Hordeum vulgare],1CNS_B Crystal Structure Of Chitinase At 1.91a Resolution [Hordeum vulgare] |
| 4DWX_A | 1.52e-29 | 87 | 330 | 3 | 229 | CrystalStructure of a Family GH-19 Chitinase from rye seeds [Secale cereale],4DWX_B Crystal Structure of a Family GH-19 Chitinase from rye seeds [Secale cereale],4DYG_A Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4 [Secale cereale],4DYG_B Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4 [Secale cereale] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P52404 | 6.23e-35 | 107 | 346 | 94 | 307 | Endochitinase 2 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB2 PE=2 SV=1 |
| P52403 | 1.69e-34 | 107 | 346 | 96 | 309 | Endochitinase 1 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB1 PE=2 SV=1 |
| P52405 | 6.00e-34 | 107 | 346 | 96 | 309 | Endochitinase 3 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB3 PE=2 SV=1 |
| Q05538 | 5.97e-33 | 107 | 346 | 100 | 313 | Basic 30 kDa endochitinase OS=Solanum lycopersicum OX=4081 GN=CHI9 PE=1 SV=1 |
| P24091 | 8.54e-33 | 107 | 346 | 102 | 315 | Endochitinase B OS=Nicotiana tabacum OX=4097 GN=CHN50 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000235 | 0.999086 | 0.000204 | 0.000164 | 0.000149 | 0.000134 |
