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CAZyme Information: MGYG000002533_03078

You are here: Home > Sequence: MGYG000002533_03078

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio vulnificus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio vulnificus
CAZyme ID MGYG000002533_03078
CAZy Family GH1
CAZyme Description Beta-glucosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
449 MGYG000002533_7|CGC4 51279.69 4.9246
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002533 4933179 Isolate Bangladesh Asia
Gene Location Start: 136610;  End: 137959  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.- 3.2.1.23 3.2.1.74 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 15 441 5.3e-160 0.972027972027972

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00232 Glyco_hydro_1 0.0 15 439 7 446
Glycosyl hydrolase family 1.
TIGR03356 BGL 0.0 15 437 2 426
beta-galactosidase.
COG2723 BglB 3.44e-169 16 439 7 448
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
PRK13511 PRK13511 1.80e-113 4 438 3 460
6-phospho-beta-galactosidase; Provisional
PLN02814 PLN02814 5.46e-88 16 437 31 476
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMV39401.1 0.0 1 449 1 449
CBG21112.1 0.0 1 449 1 449
BAC96154.1 0.0 1 449 1 449
ALM72538.1 0.0 1 449 1 449
ANH64901.1 0.0 1 449 1 449

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Z1H_A 4.16e-152 16 441 14 445
ChainA, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
6ZIV_AAA 1.57e-143 16 441 18 450
ChainAAA, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_BBB Chain BBB, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_CCC Chain CCC, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_DDD Chain DDD, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_EEE Chain EEE, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_FFF Chain FFF, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_GGG Chain GGG, Beta-glucosidase [Alicyclobacillus tengchongensis],6ZIV_HHH Chain HHH, Beta-glucosidase [Alicyclobacillus tengchongensis]
7E5J_A 2.27e-143 16 444 9 444
ChainA, Beta-glucosidase [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
6RJK_A 1.11e-141 16 437 45 473
Structureof virulence factor SghA from Agrobacterium tumefaciens [Agrobacterium tumefaciens A6],6RJK_B Structure of virulence factor SghA from Agrobacterium tumefaciens [Agrobacterium tumefaciens A6],6RJM_A Complex structure of virulence factor SghA and its hydrolysis product glucose [Agrobacterium tumefaciens A6],6RJM_B Complex structure of virulence factor SghA and its hydrolysis product glucose [Agrobacterium tumefaciens A6]
6RJO_A 6.29e-141 16 437 45 473
Complexstructure of virulence factor SghA with its substrate analog salicin [Agrobacterium tumefaciens A6],6RJO_B Complex structure of virulence factor SghA with its substrate analog salicin [Agrobacterium tumefaciens A6],6RK2_A Complex structure of virulence factor SghA mutant with its substrate SAG [Agrobacterium tumefaciens A6],6RK2_B Complex structure of virulence factor SghA mutant with its substrate SAG [Agrobacterium tumefaciens A6]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P12614 6.74e-143 16 437 14 442
Beta-glucosidase OS=Agrobacterium sp. (strain ATCC 21400) OX=74562 GN=abg PE=3 SV=1
P22505 1.84e-137 15 441 10 443
Beta-glucosidase B OS=Paenibacillus polymyxa OX=1406 GN=bglB PE=1 SV=1
Q08638 4.34e-130 17 441 10 439
Beta-glucosidase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=bglA PE=1 SV=1
Q03506 1.28e-127 15 441 8 443
Beta-glucosidase OS=Niallia circulans OX=1397 GN=bglA PE=1 SV=3
B9K7M5 4.25e-127 17 441 8 437
1,4-beta-D-glucan glucohydrolase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=gghA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002533_03078.