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CAZyme Information: MGYG000002540_01330

You are here: Home > Sequence: MGYG000002540_01330

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella clara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella clara
CAZyme ID MGYG000002540_01330
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
469 MGYG000002540_22|CGC2 52050.78 5.2246
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002540 4187245 Isolate not provided not provided
Gene Location Start: 60933;  End: 62342  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002540_01330.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 185 432 6.2e-30 0.7384615384615385

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 0.009 197 314 223 347
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQA07135.1 4.42e-259 7 464 14 472
QUT42764.1 2.51e-258 7 464 14 472
QUT70389.1 2.51e-258 7 464 14 472
BCA49442.1 2.51e-258 7 464 14 472
ALJ42773.1 1.01e-257 7 464 14 472

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002540_01330.