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CAZyme Information: MGYG000002602_01101
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-274 sp900545305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; CAG-274; CAG-274 sp900545305 | |||||||||||
| CAZyme ID | MGYG000002602_01101 | |||||||||||
| CAZy Family | PL9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 10579; End: 16944 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 1405 | 1829 | 5.2e-97 | 0.9653333333333334 |
| SLH | 1998 | 2038 | 5.1e-16 | 0.9523809523809523 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033190 | inl_like_NEAT_1 | 6.33e-15 | 1927 | 2109 | 568 | 748 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 3.01e-11 | 1998 | 2039 | 1 | 42 | S-layer homology domain. |
| pfam07523 | Big_3 | 2.09e-06 | 560 | 634 | 2 | 67 | Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins. |
| pfam00395 | SLH | 1.42e-05 | 1939 | 1980 | 1 | 42 | S-layer homology domain. |
| pfam00395 | SLH | 1.71e-04 | 2064 | 2105 | 1 | 42 | S-layer homology domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV34223.1 | 1.30e-171 | 81 | 2109 | 42 | 1932 |
| ADD02972.1 | 4.51e-170 | 371 | 2115 | 71 | 1655 |
| ADQ05619.1 | 8.23e-167 | 371 | 2116 | 90 | 1708 |
| BAC87940.1 | 3.16e-154 | 371 | 1705 | 72 | 1172 |
| AGI38277.1 | 5.94e-154 | 371 | 1705 | 72 | 1172 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RU4_A | 8.42e-30 | 1399 | 1693 | 9 | 292 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 6BT4_A | 6.41e-14 | 1938 | 2109 | 25 | 192 | Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis] |
| 3PYW_A | 6.55e-14 | 1938 | 2109 | 4 | 171 | Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis] |
| 5OLQ_A | 4.48e-09 | 1406 | 1700 | 4 | 325 | Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P22751 | 4.24e-51 | 940 | 1693 | 33 | 639 | Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1 |
| C6CRV0 | 6.31e-36 | 1938 | 2113 | 1282 | 1459 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P0C1A6 | 6.04e-31 | 1399 | 1737 | 34 | 367 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P0C1A7 | 7.04e-29 | 1399 | 1693 | 34 | 317 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
| P38536 | 2.13e-18 | 1936 | 2116 | 1679 | 1858 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000239 | 0.999019 | 0.000214 | 0.000189 | 0.000175 | 0.000157 |