logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002708_00551

You are here: Home > Sequence: MGYG000002708_00551

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA3818;
CAZyme ID MGYG000002708_00551
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
703 78189.39 5.8486
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002708 2747526 MAG Canada North America
Gene Location Start: 288;  End: 2399  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002708_00551.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 144 412 1.2e-47 0.7804054054054054

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 4.37e-73 134 417 29 309
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 6.47e-65 134 413 131 410
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704 Glyco_hydro_18 1.06e-32 159 412 58 306
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.21e-31 159 412 59 333
Glyco_18 domain.
cd06549 GH18_trifunctional 5.63e-24 148 412 44 292
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61558.1 3.19e-266 1 699 1 676
AYA76298.1 7.52e-114 108 430 92 417
QCR32383.1 2.61e-111 25 432 31 418
QDP41482.1 5.96e-110 8 417 9 399
AFS78333.1 1.00e-106 87 428 15 360

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 1.13e-31 133 413 35 311
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4WIW_A 2.27e-25 104 421 1 340
ChainA, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_B Chain B, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_C Chain C, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_D Chain D, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_E Chain E, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_F Chain F, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2]
5JH8_A 5.88e-25 114 416 8 305
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3J_A 3.41e-22 189 410 198 410
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
4S3K_A 1.53e-20 134 410 138 412
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31682 7.85e-65 108 332 2 224
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
O05495 5.24e-30 133 411 127 401
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
O32258 1.69e-26 139 416 60 334
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 3.90e-24 139 410 139 408
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P0DPJ9 7.54e-22 189 410 197 409
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998715 0.001101 0.000101 0.000005 0.000003 0.000078

TMHMM  Annotations      download full data without filtering help

start end
60 82