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CAZyme Information: MGYG000002836_00784

You are here: Home > Sequence: MGYG000002836_00784

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerocolumna aminovalerica
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Anaerocolumna; Anaerocolumna aminovalerica
CAZyme ID MGYG000002836_00784
CAZy Family CBM3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1027 113573.34 9.4055
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002836 4582914 MAG United States North America
Gene Location Start: 74516;  End: 77599  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.78 3.2.1.176 3.2.1.8 3.2.1.- 3.2.1.55 3.2.1.73

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 5.61e-17 686 924 45 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 2.64e-12 317 375 1 54
Bacterial SH3 domain.
pfam08239 SH3_3 7.94e-09 132 188 3 54
Bacterial SH3 domain.
COG3103 YgiM 7.76e-08 1 189 1 151
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
smart00287 SH3b 1.15e-05 314 372 6 59
Bacterial SH3 domain homologues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93456.1 2.21e-282 1 1026 1 895
QHQ61172.1 1.97e-263 1 1027 1 768
ABX43817.1 6.04e-232 35 1026 194 1279
BCJ97942.1 4.94e-228 1 1026 1 907
BCN29841.1 1.68e-219 14 1027 11 890

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32041 7.05e-08 32 187 97 239
Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000476 0.998754 0.000227 0.000193 0.000163 0.000159

TMHMM  Annotations      download full data without filtering help

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9 31