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CAZyme Information: MGYG000002897_00278
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Varibaculum cambriense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum cambriense | |||||||||||
| CAZyme ID | MGYG000002897_00278 | |||||||||||
| CAZy Family | GH35 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 333827; End: 335872 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH35 | 18 | 196 | 3.8e-46 | 0.5146579804560261 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01301 | Glyco_hydro_35 | 1.46e-39 | 16 | 193 | 1 | 159 | Glycosyl hydrolases family 35. |
| COG1874 | GanA | 3.02e-21 | 17 | 263 | 8 | 245 | Beta-galactosidase GanA [Carbohydrate transport and metabolism]. |
| pfam02449 | Glyco_hydro_42 | 1.31e-19 | 37 | 320 | 8 | 262 | Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| PLN03059 | PLN03059 | 4.13e-10 | 10 | 112 | 30 | 132 | beta-galactosidase; Provisional |
| pfam01373 | Glyco_hydro_14 | 3.92e-04 | 197 | 241 | 182 | 226 | Glycosyl hydrolase family 14. This family are beta amylases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AFN45751.1 | 0.0 | 4 | 681 | 3 | 680 |
| QUC10457.1 | 0.0 | 4 | 681 | 3 | 680 |
| QCT37201.1 | 0.0 | 4 | 681 | 3 | 680 |
| QUC14854.1 | 0.0 | 4 | 681 | 3 | 680 |
| VEJ57903.1 | 0.0 | 4 | 681 | 3 | 680 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7VKX_A | 2.22e-36 | 17 | 569 | 5 | 557 | ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKX_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL0_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL0_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL1_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL1_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL5_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL5_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL6_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL6_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511] |
| 7X87_A | 2.38e-36 | 17 | 569 | 10 | 562 | ChainA, Beta-galactosidase [Ignavibacterium album],7X87_B Chain B, Beta-galactosidase [Ignavibacterium album] |
| 7VKW_A | 2.38e-36 | 17 | 569 | 10 | 562 | ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKW_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511] |
| 7VKZ_A | 3.18e-36 | 17 | 569 | 10 | 562 | ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKZ_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511] |
| 5GSL_A | 4.03e-34 | 17 | 569 | 13 | 555 | Glycosidehydrolase A [Pyrococcus horikoshii OT3],5GSL_B Glycoside hydrolase A [Pyrococcus horikoshii OT3] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O58247 | 2.20e-33 | 17 | 569 | 13 | 555 | Exo-beta-D-glucosaminidase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=glmA PE=1 SV=1 |
| Q76HN4 | 1.40e-26 | 17 | 569 | 11 | 551 | Exo-beta-D-glucosaminidase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) OX=69014 GN=glmA PE=1 SV=1 |
| Q8IW92 | 3.56e-24 | 17 | 183 | 54 | 201 | Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1 |
| Q8NCI6 | 5.00e-24 | 13 | 187 | 76 | 231 | Beta-galactosidase-1-like protein 3 OS=Homo sapiens OX=9606 GN=GLB1L3 PE=2 SV=3 |
| Q3UPY5 | 3.28e-22 | 17 | 183 | 54 | 201 | Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000054 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |