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CAZyme Information: MGYG000002898_00797
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Haemophilus_D pittmaniae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_D; Haemophilus_D pittmaniae | |||||||||||
| CAZyme ID | MGYG000002898_00797 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 73187; End: 74347 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 8 | 369 | 5.5e-141 | 0.9943502824858758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR00215 | lpxB | 0.0 | 1 | 383 | 1 | 385 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 0.0 | 6 | 386 | 2 | 381 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| PRK00025 | lpxB | 0.0 | 6 | 385 | 2 | 376 | lipid-A-disaccharide synthase; Reviewed |
| pfam02684 | LpxB | 8.14e-179 | 8 | 380 | 1 | 374 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 1.76e-51 | 6 | 359 | 227 | 584 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SNV71720.1 | 2.60e-278 | 1 | 386 | 1 | 386 |
| QOR08915.1 | 7.54e-219 | 4 | 386 | 4 | 386 |
| QOR25549.1 | 1.07e-218 | 4 | 386 | 4 | 386 |
| QOR10737.1 | 1.07e-218 | 4 | 386 | 4 | 386 |
| QOR14367.1 | 1.52e-218 | 4 | 386 | 4 | 386 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 1.29e-167 | 1 | 385 | 1 | 382 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 2.59e-167 | 1 | 385 | 1 | 382 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A5UD44 | 5.24e-204 | 1 | 385 | 1 | 385 | Lipid-A-disaccharide synthase OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=lpxB PE=3 SV=1 |
| P45011 | 7.44e-204 | 1 | 385 | 1 | 385 | Lipid-A-disaccharide synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=lpxB PE=3 SV=2 |
| Q4QLM6 | 2.13e-203 | 1 | 385 | 1 | 385 | Lipid-A-disaccharide synthase OS=Haemophilus influenzae (strain 86-028NP) OX=281310 GN=lpxB PE=3 SV=1 |
| A5UII8 | 1.74e-202 | 1 | 385 | 1 | 385 | Lipid-A-disaccharide synthase OS=Haemophilus influenzae (strain PittGG) OX=374931 GN=lpxB PE=3 SV=1 |
| A3MY79 | 5.55e-202 | 1 | 385 | 2 | 386 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000078 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |